Gene Smed_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3406 
SymbolmurQ 
ID5324290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3613582 
End bp3614478 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content66% 
IMG OID640792357 
ProductN-acetylmuramic acid-6-phosphate etherase 
Protein accessionYP_001329062 
Protein GI150398595 
COG category[R] General function prediction only 
COG ID[COG2103] Predicted sugar phosphate isomerase 
TIGRFAM ID[TIGR00274] N-acetylmuramic acid 6-phosphate etherase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCAG CAAGGACCGA AGAGCGCCAC GACAATGCAA AGGGTCTGGA CGTCATGCGC 
CCGGAGATCG CTCTTCGATT GCTTGCAGCC GGTCAACAGG AAGCGGCGAA GGCCGTGGAC
CGGGCCATCG AGCCAATTTC GGCGGCGGCC CGTCTTGCCG CCGACAGCCT CGCCTCCGGC
GGCCGGCTTG CCTATGCGGG CGCCGGAAGC TCCGGACTGA TGGCCATGGC GGATGCGCTC
GAGCTGCCGG GCACCTACGG CATAGCCCGG GAACAGATCG CCATTCTCAT CGCCGGCGGG
GCCGCAAGCC TTACCGATCT TGCGGGCGGC TACGAGGACG ATATGGAGCT TGCGCGCTTC
GATGTCCGGG GCGCCGGCAT AGGGGCTGGC GACTGTTTGA TTTCGGTATC CGCCAGCGGC
TTCACGCCCT ATGCAATCGC CGCTGCCGAA GAGGCCAGGA CACGCGGCGC GCGTATCATC
GCCATGGCCA ACAATGCCGG CGCACCGCTG CTCCAGGCCG CCGATGTCGC AATTCTCATC
GAGACACCGC CGGAGATCGT ATCCGGTTCG ACGCGCATGG GCGCCGGAAC CGCTCAGAAA
ATCGCCTTTA ACATGTTCTC GACCATGATC GGCATCCATC TCGGCCACGT GCTCGATGGC
CACATGGTCA ATCTACGTGC CGACAACATA AAGCTGCGCG GCCGCGCAAT CCGGATCGTC
TGCGACATCA CCCGCGTCAC CGCGGCCGAG GCGGAGAGGC TGCTCGACCT TGCCGGCGGC
TCGGTCAAAC TGGCGATCCT GCTGGCCTCC GGAGCGAGGG ATGCCGCCCA TGCCGAACAC
GCCCTAGAGC GTGCCGATCA CAATCTGCGC CGGGCGATCG CCATCGTTCA GGCCTGA
 
Protein sequence
MQPARTEERH DNAKGLDVMR PEIALRLLAA GQQEAAKAVD RAIEPISAAA RLAADSLASG 
GRLAYAGAGS SGLMAMADAL ELPGTYGIAR EQIAILIAGG AASLTDLAGG YEDDMELARF
DVRGAGIGAG DCLISVSASG FTPYAIAAAE EARTRGARII AMANNAGAPL LQAADVAILI
ETPPEIVSGS TRMGAGTAQK IAFNMFSTMI GIHLGHVLDG HMVNLRADNI KLRGRAIRIV
CDITRVTAAE AERLLDLAGG SVKLAILLAS GARDAAHAEH ALERADHNLR RAIAIVQA