| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3211 |
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| Symbol | aroE |
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| ID | 5324090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3386483 |
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| End bp | 3387343 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640792159 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001328870 |
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| Protein GI | 150398403 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTGATT CACGTGAAAC ATTTGTTAAC CATGCCTTCG TCGCGGGCTA TCCGGTGAAG
CATTCGCGCT CGCCGCTCAT TCATGGCTAC TGGCTGAAGC GCTTCGGAAT TCAGGGAAGC
TACCGTGCCC ACGAGGTCAC GTCCGACGCC TTCCCGGATT TCATGCGGCA GATCAAGGAG
GGAACCGCGG GCTTCTGCGG CGGCAATGTC ACGATTCCGC ATAAAGAGGC CGCCTTTCGG
CTGTCCGACC GGCCGGACGA ATTGAGCGCC GAACTGGGGG CCGCCAACAC GCTCTGGCTC
GAGAATGGGA CCATCCGCGC GACGAACACC GATGGTCGCG GTTTCGTTGC CAATCTCGAT
GAGCGCGCCA AAGGCTGGGA CCGCATCTCG GCCGCGGTCA TTCTCGGCGC CGGCGGTGCC
AGCCGTGCGG TGATCCAGGC AATCCGCGAC CGCGGGGTGA AGGCGATCCA TGTGGTGAAC
CGCACGCCCG AGCGGGCGAG GGAACTCGCG GATCGCTTCG GTAGCGCGGT GCACGCGCAT
TCCATGGCCG CGCTTCCAGA AGTTCTTTCC GGCGCCGGGC TTTTCGTGAA CACGACGTCA
CTCGGAATGG ATGGCGAGCC TGCGCCGGCG ATCGACTTTT CGAAGCTGGC GCGGGACGCC
GTCGTGACTG ATATCGTCTA TGTGCCGTTG AAGACGCCGC TGCTTCGGCA GGCCGAAGAA
CAGGGCTTTC GCGTTGTCGA TGGACTTGGC ATGCTCCTCC ACCAGGCGGC GCCCGGATTC
GAAAAATGGT TCGGCCTCAG GCCGGTCGTC GACGAAGCGC TCAGAGAGAT CATCATCAGC
GATATGGACA AGCACGCATG A
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| Protein sequence | MRDSRETFVN HAFVAGYPVK HSRSPLIHGY WLKRFGIQGS YRAHEVTSDA FPDFMRQIKE
GTAGFCGGNV TIPHKEAAFR LSDRPDELSA ELGAANTLWL ENGTIRATNT DGRGFVANLD
ERAKGWDRIS AAVILGAGGA SRAVIQAIRD RGVKAIHVVN RTPERARELA DRFGSAVHAH
SMAALPEVLS GAGLFVNTTS LGMDGEPAPA IDFSKLARDA VVTDIVYVPL KTPLLRQAEE
QGFRVVDGLG MLLHQAAPGF EKWFGLRPVV DEALREIIIS DMDKHA
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