Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3054 |
Symbol | |
ID | 5323933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3204509 |
End bp | 3205315 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640792004 |
Product | exodeoxyribonuclease III |
Protein accession | YP_001328715 |
Protein GI | 150398248 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.589919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCTTT CCATTGCCAC ATGGAACATC AACTCCGTTC GCCTGCGGAT GCCGCTGGTC GAACATTTCC TGAAGACATG GCAGCCGGAC ATCCTCTGCC TGCAGGAAAT CAAATGCATC AACGACCAGT TTCCCTCCGC GCCGCTGCGC AAGCTCGGCT ACGAATATAT CGAGATGCAC GGCCAGAAGG GCTATCACGG CGTCGCCACT ATCTCGCGCC TGCCGCTTCA CCAGCTGAGC GATCGTCGCG ATTATTGCGG TATCGGCGAT GCACGGCATC TCTCGGTCGT TTTCGCAGCC GGGGGAAAGA CGATCCGCCT GCACAACTTC TATGTCCCGG CCGGCGGCGA CGAGCCGGAC CGCACTGTCA ACCCGAAGTT CGGACACAAA CTCGACTTCG TCGATGAGAT GAAGCTCCTG CACGCGGAGG CCGAAGAAGG TATCTCTTCG ATCCTCGTCG GCGATCTCAA CATCGCGCCG CTCGAGCACG ACGTCTGGTC GCACAAGCAG CTCCTTAAGA TCGTCAGCCA TACGCCGATC GAGACCGAAG GCCTTATTTC GGTCATGACC GGCGGCGCCT GGGTCGACCT GATGCGCCGC CACACGCCAC CGCCGGAAAA GCTCTACACC TGGTGGAGTT ACAGGGCCAA GGACTGGGCC GCAGCCGACC GCGGACGCCG CCTCGACCAC ATCTGGTCCT CCGCCGATCT CGCAAACCAG CTCGTCCGCG TCGAAATCAT CAAGGAAGCG CGCGGCTGGG AGCGCCCATC CGACCACGTC CCGGTGATCG CCCATTTCGA GCTTTGA
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Protein sequence | MPLSIATWNI NSVRLRMPLV EHFLKTWQPD ILCLQEIKCI NDQFPSAPLR KLGYEYIEMH GQKGYHGVAT ISRLPLHQLS DRRDYCGIGD ARHLSVVFAA GGKTIRLHNF YVPAGGDEPD RTVNPKFGHK LDFVDEMKLL HAEAEEGISS ILVGDLNIAP LEHDVWSHKQ LLKIVSHTPI ETEGLISVMT GGAWVDLMRR HTPPPEKLYT WWSYRAKDWA AADRGRRLDH IWSSADLANQ LVRVEIIKEA RGWERPSDHV PVIAHFEL
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