Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2945 |
Symbol | |
ID | 5323822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3093659 |
End bp | 3094888 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640791896 |
Product | AFG1 family ATPase |
Protein accession | YP_001328609 |
Protein GI | 150398142 |
COG category | [R] General function prediction only |
COG ID | [COG1485] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCACG GGCGCCTTCC GCCGCCGCGG CCGCCATCCT CCTTCCCCAA TCGGCCATGG CGGCCCGGAC GCATCGTGCT TAATCCAGAC GACAGCATTC TTCGTAAGCT TGAGGGACAC GTCGCAGCCG GCGAACGGCA GCGCGACCCC GCTCAGTTCG CAATCGCAAG ACGGCTGGAC CGCCTGACCG CCGACCTTCT TGCGAGTCGC CCCTCGCGCA AGACAAACGC GCTCGGCTGG CTCTTTGCCG CTCGCAAGAA GGAGCAGCCT CCGGTCAAGG GTCTTTATAT CCACGGCGGC GTCGGGCGTG GCAAGACCAT GCTCATGGAC ATGTTCTTCG ATGCAGTGCC GATACGGCGC AAACGCCGCG CGCACTTCCA TGAGTTCATG GCTGATGTGC ACGAGCGCAT CTACCGGCAC CGGCAGAAGC TGAAGAACGG CGAGACGAAG CAGGCCGATC CCATCCCCCC CGTTGCCTCC GATCTCCTGG GCGAGGCGCG GCTCCTGTGT TTCGACGAGT TCACTGTCAC CGACATCGCC GATGCGATGA TCCTTGCGCG GCTCTTCGCC GAACTCTTCG CCAAGGGCTG CGTGCTCGTC GCCACCTCCA ATGTCGAGCC GGACAATCTC TATCGCGACG GCCTCAATCG GGGTCTTTTC CTTCCATTCA TCGATCTCCT GAAGGCGCAT GCCGAGATCA TCTCGCTCGA CACGCAAACG GATTACCGAC TCGGCAAGAC CGGTGGGACG CCCGTCTGGC TCTCGCCGCT CGGACCCGAA ACGGAAGCCG CCATGGACCG CGCCTGGTAT CGGGAGACGA GCGGAAAGCC GGGCTCCCCG GCCGAGATCG GCCGCAAGGG ACGGACCATC CGCGTGCCTG CGGCGGCCGG CCGGGCCGCG CGATTCACCT TTGCCGATCT TTGTGCGCAG CCGCTCGGAG CCTCCGACTA TCTTGCGATT GTCGCGCAAT ACAGCACCAT CTTCGTCGAC CATGTTCCGC AACTCGGACC GCACCTGCGC AACGAGACGA AGCGCTTTAT CATCCTCGTC GACGCTCTTT ACGATCAGGG CGCGCGCCTC TTCGCCTCGG CCGCGGCCGA ACCGCAGCAT CTGCTGACCG CGAGAAAGGG CACGGAAGGG TTCGAATTCG ACCGCACGGT TTCGCGCCTG ATCGAGATGC AAAGCCAGGA ATATGCTTCT CAGCACCCGG AGAACGCACC GGCAGATTGA
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Protein sequence | MRHGRLPPPR PPSSFPNRPW RPGRIVLNPD DSILRKLEGH VAAGERQRDP AQFAIARRLD RLTADLLASR PSRKTNALGW LFAARKKEQP PVKGLYIHGG VGRGKTMLMD MFFDAVPIRR KRRAHFHEFM ADVHERIYRH RQKLKNGETK QADPIPPVAS DLLGEARLLC FDEFTVTDIA DAMILARLFA ELFAKGCVLV ATSNVEPDNL YRDGLNRGLF LPFIDLLKAH AEIISLDTQT DYRLGKTGGT PVWLSPLGPE TEAAMDRAWY RETSGKPGSP AEIGRKGRTI RVPAAAGRAA RFTFADLCAQ PLGASDYLAI VAQYSTIFVD HVPQLGPHLR NETKRFIILV DALYDQGARL FASAAAEPQH LLTARKGTEG FEFDRTVSRL IEMQSQEYAS QHPENAPAD
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