Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2890 |
Symbol | |
ID | 5323767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3031856 |
End bp | 3032290 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791842 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001328555 |
Protein GI | 150398088 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGATC TCGATCAGGC GCTCATCGGC GCCCTCCGGC AAAATTCCCG CATGCCAGTC TCGACGCTTT CGGCGATCAC TGGCGTCTCG CGTGCGACAG TCGCTGCGCG CATCGACCGT CTGGTGGCCA ATGGCACGAT TGCCGCCTTC ACCATCCGCA CCGGCGCCGA AATACCCGCT TCCGGCGTCC GGGCCATCGT CATGATCGAG GTTCACGGAA AGATGGCAGA CCGTGTCGCG GAGCAATTGC GCGGGCTGCC GCAGGTGCGG GCCCTGCACA GCACCAACGG CCGGTGGGAC TTCATCGCCG AGCTTGAGGA TCGGGATCTT GCGAGTTTCG ACGAGACCTT GCGGCGCATT CGATTGATCG ATGGAATTAC CGTGACCGAA ACGAACATCC TGTTGAAGAC CAGCAAGCTG ACAGGGGCGT GGTGA
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Protein sequence | MDDLDQALIG ALRQNSRMPV STLSAITGVS RATVAARIDR LVANGTIAAF TIRTGAEIPA SGVRAIVMIE VHGKMADRVA EQLRGLPQVR ALHSTNGRWD FIAELEDRDL ASFDETLRRI RLIDGITVTE TNILLKTSKL TGAW
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