Gene Smed_2890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2890 
Symbol 
ID5323767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3031856 
End bp3032290 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content62% 
IMG OID640791842 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001328555 
Protein GI150398088 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGATC TCGATCAGGC GCTCATCGGC GCCCTCCGGC AAAATTCCCG CATGCCAGTC 
TCGACGCTTT CGGCGATCAC TGGCGTCTCG CGTGCGACAG TCGCTGCGCG CATCGACCGT
CTGGTGGCCA ATGGCACGAT TGCCGCCTTC ACCATCCGCA CCGGCGCCGA AATACCCGCT
TCCGGCGTCC GGGCCATCGT CATGATCGAG GTTCACGGAA AGATGGCAGA CCGTGTCGCG
GAGCAATTGC GCGGGCTGCC GCAGGTGCGG GCCCTGCACA GCACCAACGG CCGGTGGGAC
TTCATCGCCG AGCTTGAGGA TCGGGATCTT GCGAGTTTCG ACGAGACCTT GCGGCGCATT
CGATTGATCG ATGGAATTAC CGTGACCGAA ACGAACATCC TGTTGAAGAC CAGCAAGCTG
ACAGGGGCGT GGTGA
 
Protein sequence
MDDLDQALIG ALRQNSRMPV STLSAITGVS RATVAARIDR LVANGTIAAF TIRTGAEIPA 
SGVRAIVMIE VHGKMADRVA EQLRGLPQVR ALHSTNGRWD FIAELEDRDL ASFDETLRRI
RLIDGITVTE TNILLKTSKL TGAW