| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2887 |
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| Symbol | |
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| ID | 5323764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3023390 |
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| End bp | 3025303 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791839 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_001328552 |
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| Protein GI | 150398085 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCCAC CACGATCGAG TATTGCGCAC TGGAAGACAG CGACCGCGCT CACAATCGTG
GCTTCGGCGG TGCTCGGCCC GTTTTCCGTT GGCGAGGCCT ATGCGTTCAA GATTTTCGGC
ATGCGTTTCT TCGAAAGCGC CGAAGACGAA GTGCAGGTCG TAGACCCCGT CCGCTATACG
CTTGCTTTCG AGGCAGGAAC GGATGACGAA GAGCTGCGCG AGGCGCTGGA GAACGGCTCC
CGGCTGGTAC AGGATCAGGA AGAACCGGTC TCGGGCGATC TCGGGCTGGC GATCAAGGCA
CGCGACGACC GAGATCGGCT GCTGGCGGTG CTCTACGAAA AGGCGCGCTA CGGCGGCACG
GTCAGCATCC TCATCAACGG CCAGGACATA GACAGCCTGC CCCCCGATCC CGCCTTCCCG
GACGGGCAGC CGGTGCCGGT CGTGGTTCGC GTTACTCCGG GCGCGGCTTT CAAGCTTGGC
TCCGTGCGGC TCGAAGGAGA CGCCGCGCGG CTCGATCCCG CAGCCTACGG CCTCGAACGT
GGCGCCCGCG CCGACTCGAC CTTGATCATC AAGGCCGGCG AGCAAATCGT CGACGATCTC
AAGGAACAGA GCCGGCCGCT GGCGAAGCTC TCCGAGCGCA GCGTCGTCGC CGATCATGCG
ACCACCACCG TCGACGTGAC GATCAGCGCC GATGGCGGGC CGGTCGCGCC CGTCGGCGAC
CTGACCGTCA GCGGGGCCAA AACCGTCGAT CCGGATTTCG TCAAGGACTA TTCCCGCCTG
AACCACGGCC GTCCCTACTC GCCGGAGAAT ATCCGAAAGG CCGCAGAGCG GCTGCGGCAA
CTGAACGTCT TTTCCAGCGT CACCATCAAT GAAGCCGATG GACTCGCGAC CGACGGCACG
ATACCGATGA ATATCCAGGT CTCTGAAGGC AAGCACCGCT ATTTCGGTTT TGGCGGTCAG
GTCTCGACCA CGGATGGCCT CGGCCTCCAG GGCTATTGGG GCCATCGCAA TCTCTTCGGA
CGCGCCGAGT CGCTCCGGAT CGAGGGTTCA GTAGACCGGC TCGGCGAGAC CAAAGACGTT
ACCGGGCTCG ACTACTCGGC CGGCATCCTC TTCGCCAAGC CCGGCGCCTT CGGACCCGCG
TCGACCTTCA CGGCCAGCGT TAAGGCGGCA ATCGTCGACC CAGACGCCTA TAGCGCCAAG
ACGGTGACCG CCGCGATCGG CGCCGGCTTC GAGCTATCGC CCGAGGACAC CTTCTCCGTC
GGTGCGGAAG TGGGCTGGGC GGATGTGGAC GACGCATTCG GCTCCAATTC CTACATCACC
GCAGCTCTTC CGTTCGAATA TGTCCACGAT GCGCGCGACG ACAAGCTGAA CCCCACGGAG
GGCTACCGGG CGCTGATCAA TGCCAAGCCG AGCTACGAGA TCGAGGGGAA GACCTTCTTC
AGCTCCTTCG AAGCGTCCGC ATCCGGCTAT TACGCGCCTG GAACGGAGAA TCGCTTCGTG
CTCGCCGGCA AGCTCGGCGC CGGCGTGCTT GTCGGCGGAG ACGAACTCTC CGACATTCCT
GCAACCCGAC GGTTCTTTCT CGGCGGCGGC GGGTCGGTGC GTGGCTACTC CTACCAGGAA
ATCAGCCCGC GCGACGCCGA AAACGAGCTG ACCGGCGGCC GCTCCTATGT GAGCGGCTCC
CTCGAAGCCC GCATCGGCGT CACCGATACG ATAGGCATCG TACCTTTTGT CGATTTCGGA
ACTGTTTCGG AAAGTACGAC GCCCGATTTC TCCGACATCC GGGCCGGCGC CGGCATCGGC
CTGCGCTATG CGACGCCTTT CGGGCCGATC CGTCTCGACT TCGCCGTGCC GCTCAACAAA
TATCCGGGCG GCACCGATTA CGGAATCTAT GCAGGGATTG GCCAGTCCTT CTGA
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| Protein sequence | MSPPRSSIAH WKTATALTIV ASAVLGPFSV GEAYAFKIFG MRFFESAEDE VQVVDPVRYT
LAFEAGTDDE ELREALENGS RLVQDQEEPV SGDLGLAIKA RDDRDRLLAV LYEKARYGGT
VSILINGQDI DSLPPDPAFP DGQPVPVVVR VTPGAAFKLG SVRLEGDAAR LDPAAYGLER
GARADSTLII KAGEQIVDDL KEQSRPLAKL SERSVVADHA TTTVDVTISA DGGPVAPVGD
LTVSGAKTVD PDFVKDYSRL NHGRPYSPEN IRKAAERLRQ LNVFSSVTIN EADGLATDGT
IPMNIQVSEG KHRYFGFGGQ VSTTDGLGLQ GYWGHRNLFG RAESLRIEGS VDRLGETKDV
TGLDYSAGIL FAKPGAFGPA STFTASVKAA IVDPDAYSAK TVTAAIGAGF ELSPEDTFSV
GAEVGWADVD DAFGSNSYIT AALPFEYVHD ARDDKLNPTE GYRALINAKP SYEIEGKTFF
SSFEASASGY YAPGTENRFV LAGKLGAGVL VGGDELSDIP ATRRFFLGGG GSVRGYSYQE
ISPRDAENEL TGGRSYVSGS LEARIGVTDT IGIVPFVDFG TVSESTTPDF SDIRAGAGIG
LRYATPFGPI RLDFAVPLNK YPGGTDYGIY AGIGQSF
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