Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2886 |
Symbol | |
ID | 5323763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3022256 |
End bp | 3023128 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640791838 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001328551 |
Protein GI | 150398084 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTCAG AAATTTCCGT AAAACACCGT TTCGCCGATT TGGACGGCCT ACGCGTCTTC TATCGCGAAG CCGGACCGAA GGACGCGCCG GTAGTGCTCC TCCCGCACGG CTATCCCTGC TCGTCATACG AGTTCCGCAA TTTCATGCCG CGCCTGGCCG ACCGCTGGAG GCTCCTCGCT CCGGATTTTC CCGGGTCGGG ATATAGCGAC ACGCCGGGCG GGTTCGCCTA CGACTTCGAC GGGTTCACCG ATTTGCTCGA TGCCTTCATC CGGCGCCTGG GCCTGGAGAG ATTCGCACTT TATTTGCATG ATTTCGGATC GCAGATCGGG CTTCGGCTGG CGATGCGCCG TCCTGAGCGG ATTACGGCGC TTATCATTCA AAATGGCGAC ATCTACGAAG ATGAGCTTGG TCCGAAATAC GCGCCGTTGC AGGCCTATTT CCGCAATCCT ACGCCGGAAG GCCGATCCAT GCTCGGTAAA GCCGTCAGCG AGGAGGGATA CCGCGACGAG TTTCTCAACG ATGTCCGGCC CGAACTTGCC GAACGGATTT CTCCCGACCT CTGGAAACTT CATTGGTCGC TGACGACGGC CCGGCGGCGG GAGATCGCGA TAGACGTCAT CGCCGGGTTG CGGGAAAATC TCGCATGGTT CCCCCGCTAT CAGGCCTATC TGCATGAGCA TCGGCCGCCT ACGCTGATCG TCTGGGGTCC ACAGGACGGC TACATGCCCG AGGGCTCTGC TCGAGCCTAT CTCCGCGATC TGCCCGACGC CGAATTGCAT CTGCTCGACG GAGGCCATTG GCTGCTGGAG ACGAACCTGT CCGAGGTCGT TTCCCTCTCA CGGGATTTCC TCACGCGCGC GGCACCGGGG TGA
|
Protein sequence | MKSEISVKHR FADLDGLRVF YREAGPKDAP VVLLPHGYPC SSYEFRNFMP RLADRWRLLA PDFPGSGYSD TPGGFAYDFD GFTDLLDAFI RRLGLERFAL YLHDFGSQIG LRLAMRRPER ITALIIQNGD IYEDELGPKY APLQAYFRNP TPEGRSMLGK AVSEEGYRDE FLNDVRPELA ERISPDLWKL HWSLTTARRR EIAIDVIAGL RENLAWFPRY QAYLHEHRPP TLIVWGPQDG YMPEGSARAY LRDLPDAELH LLDGGHWLLE TNLSEVVSLS RDFLTRAAPG
|
| |