Gene Smed_2837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2837 
Symbol 
ID5323707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2961997 
End bp2962785 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content58% 
IMG OID640791782 
Productresponse regulator receiver protein 
Protein accessionYP_001328502 
Protein GI150398035 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000311945 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.812847 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGTG CGACCTCGGG GTTGGGCAGT TTCCAAGACA GCAAAAGCGT ATCACCGGAG 
AAAAGCAAAA TAGTCATGCT CGCAAGGACG GACCTCTTCG CCGAGTGTCT GGCCCAGGCG
ATAGGTTCAC GGTTCCAGGA TCAGGACGTG GTGCGCCTTT CGGATGCCGA TAGCCTTCTG
GACGGCAATC TCGTGAATGT GTCGCTGGTC ATGCTCTACC GGGTACCGGC CACGACCTTT
CCATCCACCA TCAGAATGAT CCATGAGTTT CATCCTAAAG CGGCGGTCGG CTTGCTGGTT
GAGAACGCGG AAGGGCTCGA CGCGTCGGTT GCGCACCTGG TCGAAGAGGG GATGATCCAC
GGCGTGTTGC CGCTAAATCT CCATCTCGAT GTTTGCCTTA CCGCCATCGA CCTCCTGATG
AAGGGCGGCG AGCACTTTCC CGCGGCACTC CTCAGACGGC TTGCGCCGAA GAATCCCGGA
GAGCGGGACT TCTCTGGCCC GAACGAAACG GCATCTGAAA ACGGGAATCC GGAGCGCAGC
AAAGGGCTTG GCCAAGTCGT GCTCACGACA CGCGAGATCC AGATTCTCGA TCTCATCTGC
ATGGGCACGC AGAACAAGAT CATTGCAGAT CGACTCGGCC TGTCCGAAAA TACCGTGAAG
GTTCACGTCC GCAACATCTA CAAGAAAATG AACGTTCGCA ATCGAACCGA GGCGGCGTCG
CGCTATTTCA GAAGCGATGA AGGCCTAGGC CCTTCTCGCA CGCCGCCGCC GACGCGCTGG
CGCAATTGA
 
Protein sequence
MLRATSGLGS FQDSKSVSPE KSKIVMLART DLFAECLAQA IGSRFQDQDV VRLSDADSLL 
DGNLVNVSLV MLYRVPATTF PSTIRMIHEF HPKAAVGLLV ENAEGLDASV AHLVEEGMIH
GVLPLNLHLD VCLTAIDLLM KGGEHFPAAL LRRLAPKNPG ERDFSGPNET ASENGNPERS
KGLGQVVLTT REIQILDLIC MGTQNKIIAD RLGLSENTVK VHVRNIYKKM NVRNRTEAAS
RYFRSDEGLG PSRTPPPTRW RN