Gene Smed_2835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2835 
Symbol 
ID5323705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2960158 
End bp2960676 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content61% 
IMG OID640791780 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001328500 
Protein GI150398033 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.242458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCAAC TTGACGGATT CGACCTCAAG ATTCTGAGCG AGCTTCAGCG CGATGGTCAT 
CTGACCAACA ACGAGTTGTC CGAACGCGTC GCGCTCTCTC CTTCGCAGTG CTCGCGCCGC
CGGACGCGTC TGGAGGCGGA AGGCATCATT ACCGGCTATC AGGCGCAGAT CGACCGACAG
AGACTGGGAC TCGACCTGAT GGTGGTGATT TCGGTCACGC TGGCCACGCA CAACCGCGAC
AATGCCAAGC GCTTCGCCAA TCTCGTCTCG GCCCTGCCGG AGGTGCTGGA GGCCTATGCG
CTGACCGGTG AAATGGATTA CCACCTGCGT GTCGTGACAC CGGATCTTGC CGGACTCTCC
CGCTTCGTCA ACGAGGTGCT CCTTCCGCAT GACAGCGTGC AGCACGTCAA GACATCGATC
GTGCTTGAGA CGCTCAAGAG TTTCGAGGGG CTGCCGATAC CGACGCAGAT GAAGGGTGCC
GCCGCCATGC GCGTCGCTGC GAAACCTAGT CCGGCGTGA
 
Protein sequence
MEQLDGFDLK ILSELQRDGH LTNNELSERV ALSPSQCSRR RTRLEAEGII TGYQAQIDRQ 
RLGLDLMVVI SVTLATHNRD NAKRFANLVS ALPEVLEAYA LTGEMDYHLR VVTPDLAGLS
RFVNEVLLPH DSVQHVKTSI VLETLKSFEG LPIPTQMKGA AAMRVAAKPS PA