Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2835 |
Symbol | |
ID | 5323705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2960158 |
End bp | 2960676 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640791780 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001328500 |
Protein GI | 150398033 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.242458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCAAC TTGACGGATT CGACCTCAAG ATTCTGAGCG AGCTTCAGCG CGATGGTCAT CTGACCAACA ACGAGTTGTC CGAACGCGTC GCGCTCTCTC CTTCGCAGTG CTCGCGCCGC CGGACGCGTC TGGAGGCGGA AGGCATCATT ACCGGCTATC AGGCGCAGAT CGACCGACAG AGACTGGGAC TCGACCTGAT GGTGGTGATT TCGGTCACGC TGGCCACGCA CAACCGCGAC AATGCCAAGC GCTTCGCCAA TCTCGTCTCG GCCCTGCCGG AGGTGCTGGA GGCCTATGCG CTGACCGGTG AAATGGATTA CCACCTGCGT GTCGTGACAC CGGATCTTGC CGGACTCTCC CGCTTCGTCA ACGAGGTGCT CCTTCCGCAT GACAGCGTGC AGCACGTCAA GACATCGATC GTGCTTGAGA CGCTCAAGAG TTTCGAGGGG CTGCCGATAC CGACGCAGAT GAAGGGTGCC GCCGCCATGC GCGTCGCTGC GAAACCTAGT CCGGCGTGA
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Protein sequence | MEQLDGFDLK ILSELQRDGH LTNNELSERV ALSPSQCSRR RTRLEAEGII TGYQAQIDRQ RLGLDLMVVI SVTLATHNRD NAKRFANLVS ALPEVLEAYA LTGEMDYHLR VVTPDLAGLS RFVNEVLLPH DSVQHVKTSI VLETLKSFEG LPIPTQMKGA AAMRVAAKPS PA
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