| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2800 |
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| Symbol | lysS |
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| ID | 5323670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2922188 |
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| End bp | 2923684 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791745 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001328465 |
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| Protein GI | 150397998 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.366635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.285218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA AGACAGAAAA CTCCGGCCTT TCCTCCGATG CGACGGAAGT ACGCGCCCAG
AAGCTGAAGC TCCTGCGCGA GCAGATCGGC GATGTCTATC CCGCGCATTT CCATCGGACG
ATGACCAATG CGGAATTGGC CGAGAAGTAC CAGGACCTCG CGCCGGACAC GGAGACGCAG
GACCTCGTCA CCGTTGCCGG ACGAGTCTAT TCCTCGCGCA ATTCCGGCAT GTTCATGGAC
ATCCATGACG CTTCCGGCAA GATCCAGGTC TTCTCCCACA AGGACACGAC GCCTGAGGAG
GCGCGTGGCC TCCTGCCGAT GATCGACCTC GGAGATGTCA TCGGCGTCAC CGGGCTCGTC
CGCCGCACGA AGCGCGGCGA ACTGACGATC AACGCGCAGC AGATCACCAT GCTGACCAAG
TCGCTCCTGC CGATGCCGGA AAAGTATCAC GGCCTTGCAG ACATCGAGAC GCGCTATCGC
AAGCGATATC TGGACATCAT GGTCAATGAG GAATCGAAGC TGCGCTTCCA GCAAAGAAGT
CGCATCGTCT CCAGCCTGCG CCGCTTCCTC GAGGACGAAG GCTTCATGGA AGTCGAGACG
CCGATGCTGC AGCCGATCTA CGGTGGCGCG ACGGCCGAGC CCTTCAAGAC CCATCACAAT
ACGCTGAAGC TCGATATGTA TCTGCGCATC GCGCCCGAGC TTTATCTCAA GCGCGTGCTG
GTCTCCGGTC TCACCGACAA AGTCTTCGAA ATCAACCGCA ACTTCCGCAA CGAAGGCGTC
TCCACCCGGC ACAATCCGGA ATTCACCATG ATGGAGTGCT ATTGGGCCTA TGCCGACTAT
GAAGACGTAA TGGGCCTCGT CGAACGTATG TTCGAGACCC TTGCTCTGGC GGTCCACGGC
ACGACCGAAT TCGAGTTCGG CGACAAGCAG CTCTCCTTCA AGGGGCCGTT CCCGCGCGTC
TCCATGCCCG CCGCTGTCAA GGACGCGACC GGCATTGATT TCCTAGCGAT CAAAAGCGAC
GAGGAGGCCC GACAGGCGGC TCGCGATGCC GGTGTCGAGA TCGAGAAGGA CGCGACATGG
GGCGAGGTGC TCGCCTTCCT CTTCGAGGAA AAGGTCGAAG CGACGCTGAT CCAGCCTGCC
CACGTCATCC ATTTCCCGAA GGACATCTCG CCCTTCGCCA AAGAGGTGCC GGGCGAGCCG
AGGCTCGTCG AGCGGTTCGA GACCTATTGC AACGGATGGG AGATCGGCAA CGCCTTTTCC
GAGCTCAACG ACCCGGTCGA GCAACGCGCT CGTATGGTCG AACAAATGGA ACAGGCGCAC
GCACGCGGCG AGAAGGAAAA GACGCTCGAC GAGGACTTCC TCGATGCCAT GGACCAGGGC
ATGCCGCCCG CAGGTGGTTT GGGGATCGGT GTCGACCGGC TGATCATGCT GCTCACCAAC
TCGCCGTCGA TCCGCGACAT CATTCTCTTC CCGGCCCGAC GCCATAAGTC CGATTGA
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| Protein sequence | MTDKTENSGL SSDATEVRAQ KLKLLREQIG DVYPAHFHRT MTNAELAEKY QDLAPDTETQ
DLVTVAGRVY SSRNSGMFMD IHDASGKIQV FSHKDTTPEE ARGLLPMIDL GDVIGVTGLV
RRTKRGELTI NAQQITMLTK SLLPMPEKYH GLADIETRYR KRYLDIMVNE ESKLRFQQRS
RIVSSLRRFL EDEGFMEVET PMLQPIYGGA TAEPFKTHHN TLKLDMYLRI APELYLKRVL
VSGLTDKVFE INRNFRNEGV STRHNPEFTM MECYWAYADY EDVMGLVERM FETLALAVHG
TTEFEFGDKQ LSFKGPFPRV SMPAAVKDAT GIDFLAIKSD EEARQAARDA GVEIEKDATW
GEVLAFLFEE KVEATLIQPA HVIHFPKDIS PFAKEVPGEP RLVERFETYC NGWEIGNAFS
ELNDPVEQRA RMVEQMEQAH ARGEKEKTLD EDFLDAMDQG MPPAGGLGIG VDRLIMLLTN
SPSIRDIILF PARRHKSD
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