| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2708 |
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| Symbol | |
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| ID | 5323577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2816713 |
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| End bp | 2817930 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791652 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001328373 |
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| Protein GI | 150397906 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.384305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAA ACCGCAGGAC GTTCTTCCGA CATATAGCCG CCGCTCTCGT CGTTGCCGCC
GCTTTTGGGT CGTCGCCAGC GCGCGCGGAT CAAGGTTTTC AAAACTGGAT CAACAACTTC
TATGCGACGG CTGCCAAGAG CGGCATCAGC CAGGCAACCT ATCGCAAGGC CTTTGCCGGT
GTGAAGACGC CTGATCAGGC CGTGCTGGAG AAGGCGGCCT ATCAGCCTGA GTTCAAGCAC
AAGATCTGGG AGTATATCGA CGCCCGTGTC AATCCGTACA CCAAGCGGAC GGGACAGGAA
ATGGCGGCGA AGCATGCACG CACGCTCAAC GCTCTCGAGC GGCACTACGG CGTCGACAAG
TCCGTTCTGC TGGCCATCTG GTCTATGGAA TCGAATTACG GCGCGATCCT CGAAAAAGAC
GATCGGCTGC ATTACGTGCC GCGGGCGCTG GCGACGCTTG CCTATGCCGA TAAGAAGCGG
GCCAAATTCG CCCGTACACA ACTTATTGCG GCATTGAAGA TCCTGCAGAG CGGCGATATC
ACCCCGCGAG AACTGACGGG CTCCTGGGCG GGTGCCATGG GGCACACGCA GTTCATTCCG
ACGAGCTACC TGCTCTATGC CGTCGACGTC GACGGGAACG GACATAGAGA CATCTGGAAC
TCGGTGCCGG ATGCCCTGGC GACGGCTGCC AATCTCTTGC GAAAGAACGG ATGGAGATCG
GGCGAGACTT GGGGTTACGA GATCGTCCCG CCGGCAAATG CGGCGCAATA TTCAGGCCAG
ACGAAAACGC TTGGCCAGTG GGCAGCCCTT GGCTTTGCCC GCCCGAATGG TAAGGGTTTC
AGCAATTCGA AGATGCGTGC GGTCCTGAAA ATGCCCGGCG GCAGCAACGG CCCCGGCTTC
CTGGTGACCA AGAATTTCTT CGTCATCAAG CGCTACAACG CCTCCGACTC CTACGCGCTC
GGCGTCGGCC TCCTTGCCGA TCAGATCGCA GGTTATGCGG GCATGCAGCA GCGCTGGCCG
CGTCCGGACG GCTCGCTCGA CATCAGCGAA AAGTTCGAGC TGCAGAACCG GCTGAAGGAA
CTCGGCTATT ACGATGGCGA AGTCGACGGC AATTTCGGCT CGGGTTCGAA GGCCGCGATC
GAGGCGTTCC AGGCACAGAA CGGCCTGAAA CCGGACGGGC AGCCGACACA GCATCTCCTG
CGCGCCCTGC GCCGGTAA
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| Protein sequence | MSTNRRTFFR HIAAALVVAA AFGSSPARAD QGFQNWINNF YATAAKSGIS QATYRKAFAG
VKTPDQAVLE KAAYQPEFKH KIWEYIDARV NPYTKRTGQE MAAKHARTLN ALERHYGVDK
SVLLAIWSME SNYGAILEKD DRLHYVPRAL ATLAYADKKR AKFARTQLIA ALKILQSGDI
TPRELTGSWA GAMGHTQFIP TSYLLYAVDV DGNGHRDIWN SVPDALATAA NLLRKNGWRS
GETWGYEIVP PANAAQYSGQ TKTLGQWAAL GFARPNGKGF SNSKMRAVLK MPGGSNGPGF
LVTKNFFVIK RYNASDSYAL GVGLLADQIA GYAGMQQRWP RPDGSLDISE KFELQNRLKE
LGYYDGEVDG NFGSGSKAAI EAFQAQNGLK PDGQPTQHLL RALRR
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