Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2677 |
Symbol | |
ID | 5323546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2779531 |
End bp | 2779968 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640791621 |
Product | hypothetical protein |
Protein accession | YP_001328342 |
Protein GI | 150397875 |
COG category | [S] Function unknown |
COG ID | [COG5480] Predicted integral membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.355095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.206179 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGTTTG GATCCATCCT CCTGTTTTCT TTAGCAGTTT CCGTCCCATT TCTCTCCGCT GGCGCTGCCC GCGCCGATTT TCGCGTGTGC AACGGGACAC AGACTCTTGT CGGCGTCGCG ATCGGATACC GGGCTAAGGA AGGCTGGGTC ACGGAAGGCT GGTGGCAGGT GCCGGCAACG ACCTGCGCTA CCCTGATCGA GGGCGAACTC CAGTCCCGGT ACTACTATCT CTACGCGGAA GATGCGGCCA AAGGCGGCCG CTGGACCGGC GACGTCAACA TGTGCGTGGC CGAGAACGAG TTCAAGATCG TCGGTGTCCA GGACTGCTTC GCCCGCGGTT TCCAGCGTAT GGGATTCAAG GAATATGACA CGGGGCGGCA GGGAAGCTGG ATGGTTCAGC TTTCCGACAC GCCCGGCACG CAGGAAAGCC AGAATTGA
|
Protein sequence | MTFGSILLFS LAVSVPFLSA GAARADFRVC NGTQTLVGVA IGYRAKEGWV TEGWWQVPAT TCATLIEGEL QSRYYYLYAE DAAKGGRWTG DVNMCVAENE FKIVGVQDCF ARGFQRMGFK EYDTGRQGSW MVQLSDTPGT QESQN
|
| |