Gene Smed_2677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2677 
Symbol 
ID5323546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2779531 
End bp2779968 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content60% 
IMG OID640791621 
Producthypothetical protein 
Protein accessionYP_001328342 
Protein GI150397875 
COG category[S] Function unknown 
COG ID[COG5480] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.355095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.206179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTTG GATCCATCCT CCTGTTTTCT TTAGCAGTTT CCGTCCCATT TCTCTCCGCT 
GGCGCTGCCC GCGCCGATTT TCGCGTGTGC AACGGGACAC AGACTCTTGT CGGCGTCGCG
ATCGGATACC GGGCTAAGGA AGGCTGGGTC ACGGAAGGCT GGTGGCAGGT GCCGGCAACG
ACCTGCGCTA CCCTGATCGA GGGCGAACTC CAGTCCCGGT ACTACTATCT CTACGCGGAA
GATGCGGCCA AAGGCGGCCG CTGGACCGGC GACGTCAACA TGTGCGTGGC CGAGAACGAG
TTCAAGATCG TCGGTGTCCA GGACTGCTTC GCCCGCGGTT TCCAGCGTAT GGGATTCAAG
GAATATGACA CGGGGCGGCA GGGAAGCTGG ATGGTTCAGC TTTCCGACAC GCCCGGCACG
CAGGAAAGCC AGAATTGA
 
Protein sequence
MTFGSILLFS LAVSVPFLSA GAARADFRVC NGTQTLVGVA IGYRAKEGWV TEGWWQVPAT 
TCATLIEGEL QSRYYYLYAE DAAKGGRWTG DVNMCVAENE FKIVGVQDCF ARGFQRMGFK
EYDTGRQGSW MVQLSDTPGT QESQN