Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2656 |
Symbol | |
ID | 5323525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2760546 |
End bp | 2762450 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791600 |
Product | adenylyl cyclase class-3/4/guanylyl cyclase |
Protein accession | YP_001328321 |
Protein GI | 150397854 |
COG category | [S] Function unknown |
COG ID | [COG5616] Predicted integral membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTCGGCT ACAAGATGAA ATTCGAGGCT CTGTTGGAAC GCCGTCTCAC TGCCATTCTC GCCGCCGATG TGGTGGGCTA TAGCCGCCTG ATGGGTGCGG ATGAGGCCGG CACGCTCGCG GCGCTGAAGC GGCATCGACG CGAGTTGCTG GAGCCGAAGA TCGCCGAGCA CAAGGGCCGC ATCGTCAAGC TGGCGGGAGA CAGCTTCCTG GTAGAATTTT CGAGCGTTGT GAACGCGGTC GCCTGCGCCG TCGCAATCCA GCGCGGCATG GTTTCCTGCA ACGAAGGTCT GCCGAAAAGC AGGCGTATCG AACTCAGGAT CGGCATCCAT CTCGGCGACG TGATCGTTGA GGACGGCGAC ATCTTCGGCG ATGGCGTCAA CGTCGCTGCG CGGCTCGAAG GGCTTGCCGA CCCGTCCGGC ATCGCCGTTT CGGCCTCCGT GCGCGACCAT GTCGGCTCGA GACTCGATGT CGGCTTCGTC GACAAGGGCG AATACAGTCT GAAGAACATC GCGCCGACAA TTCGCGTCTA CACGGTTTCT CTCGGCGCGC ATCCGGTCGC AAAGGGTTCG GAACCGGCCG GTGTCGTTGA CCGTGGCTAC GAATTGTCCA TCGCCGTCCT GCCCTTCACC AATATGAGCC ATGATCCCGA GCAGGAATAC TTCTCCGACG GCATCACCGA GGACGTCATC ACCGATCTTT CGAAGGTTGC GCGGCTGCAC GTCGTCGCCC GCAACACCGT CTTCACCTAC AAGGGCAAGG CAGTGAAGGT GAAACAGATC GCCCACGAAC TCGGCGTGCG CTTCATTCTC GAAGGTAGCG TACGCAAGGC GGGCGAACGC GTGCGCATCA CCGGCCAGCT GATCGACGCC CAGACCGGCG GGCATCTGTG GGCGGACCGT TACGATCGCG ACCTGACCGA CATTTTCGCG ATCCAGGACG AGATCACGCA CGCGATCGTC AACCAGCTCA AGATAAAGCT CCTGCCGGAG GAAAAGAAGG CGATCGAAAG CGATCCCACG ACTTCCGTCG AGGCCTATAC CTACTATCTC CGGGGACGCC AGTTCTCACA TACCTGGACA AAGCCCTATC TGCTTCTCGC CCGCCGGATG TTCCTCAAGG CTGTCGAGCT CGATCCGAAC TACGCTCGTG CCTATGCGGG AATCGCCGAA TGCGAATGTG CGATCAGGGA CTGGCACGAA AAGGAGTTCC CGCTGAAGAG CATTCTCGAC ATGAGCGCCA AGGCGCTCGC GCTGGATCCG AATCTGGCGG AAGCGCACGC CTCGCGCGGG CTTGCATTGA ACCACGACGG CCAAACGGAG GAAGCGAGCC GTGAGTTCCG TCAGGCTCTC GCGCTGGATC CTTCGCTCTA TGAGGCAAAT CTCTATTATG GCCGTTTCCT GTTCGCGCAG GGTCGATTCC AGGAAGCAAT CGGCTTTTTC GAGCGCGCGG CGGAGATCAG GTCGGACGAC TATTTTTCGC CGATCCATCT GATGGGTTGC CATCTCTCGC TCGGTAGGGA AGCCGAGCGC CAGCGTTGGG CACGGATCGG CATCGAGCGG GCGACAAGAG CGCTGGAGCG GAATCCGGAA AATGCCAGTC CGGCCCATCG CGGCGCATTG GCGCTCGCGC ATATGGGTGA GGCCGAACGC GCGAAGGAAT GGGTTTCCCG AGCACTTGCG ACCGATCCCG ACGATGTGGT CGCGCAGTAC AATGCAGCAT GCGTCTATGC GCTCCTCGGT GAGGGCGAGC GTGCGCTGGA GCTGCTGGAG ACAGTGGTGC CGCAGAGCTC CAGCTATCAT GTCCTATGGT TCAATCAGGA CCCGGACCTG GATCTCATAC GCGACGATCC CCGCTTCCGC GCGCTCCTCG ACGCGCTCGG AGACTGCAAC GCCGCAGGGC CCTGA
|
Protein sequence | MLGYKMKFEA LLERRLTAIL AADVVGYSRL MGADEAGTLA ALKRHRRELL EPKIAEHKGR IVKLAGDSFL VEFSSVVNAV ACAVAIQRGM VSCNEGLPKS RRIELRIGIH LGDVIVEDGD IFGDGVNVAA RLEGLADPSG IAVSASVRDH VGSRLDVGFV DKGEYSLKNI APTIRVYTVS LGAHPVAKGS EPAGVVDRGY ELSIAVLPFT NMSHDPEQEY FSDGITEDVI TDLSKVARLH VVARNTVFTY KGKAVKVKQI AHELGVRFIL EGSVRKAGER VRITGQLIDA QTGGHLWADR YDRDLTDIFA IQDEITHAIV NQLKIKLLPE EKKAIESDPT TSVEAYTYYL RGRQFSHTWT KPYLLLARRM FLKAVELDPN YARAYAGIAE CECAIRDWHE KEFPLKSILD MSAKALALDP NLAEAHASRG LALNHDGQTE EASREFRQAL ALDPSLYEAN LYYGRFLFAQ GRFQEAIGFF ERAAEIRSDD YFSPIHLMGC HLSLGREAER QRWARIGIER ATRALERNPE NASPAHRGAL ALAHMGEAER AKEWVSRALA TDPDDVVAQY NAACVYALLG EGERALELLE TVVPQSSSYH VLWFNQDPDL DLIRDDPRFR ALLDALGDCN AAGP
|
| |