| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2526 |
|---|
| Symbol | |
|---|
| ID | 5323394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 2625257 |
|---|
| End bp | 2626150 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640791469 |
|---|
| Product | glutamyl-Q tRNA(Asp) synthetase |
|---|
| Protein accession | YP_001328191 |
|---|
| Protein GI | 150397724 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.451286 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATTT CACGACCAGA GCAACCGGTT TTTCGCTTTG CGCCGAGCCC GAACGGTTTC
CTGCATCTCG GCCACGCCCT TTCCGCGATC ATCAATCACG ACATTGCGGC TGACTCGGGC
GGCCGGTTTC TGCTGAGGAT CGAGGACATC GACAGGACTC GTTGCCGGCC GGAGTTCGAG
GCCGCGATCC TCGACGATCT CGCCTGGCTC GAGCTCGAAT GGGAGGAACC GGTGCGGCGC
CAGTCCGACC ATCTCGATCT CTATGCCTCG GCGCTCGAGC ATCTCAAAGC AATGCGTCTC
GTCTATCCGT CCGCGATGAC ACGCGGCGAG ATCAGGGCCG CGGTCGCGGC GTCGGAGGCG
AAAGGTTCCG CCTGGCCGCG CGATCCGGAC GGAACGCCGC TCTATCCCGG CCGCGAGCGC
GGTTTCAGGC CCGATGATCA GGCGGCGATC CTGGCGAGTG GCCGTCCTTA TGCCTGGCGG
CTGGACATGG AGGAGGCCGT GAAGCGTGCG GGCGGATCAC TGAGCTGGCA AGAAAAGGGT
TTTCGGGGGT CAGGTGAATA CAGCCAGATC GCCGATCCGG CCGCCTGGGG CGATGTCGTC
CTGTCGCGTT CGGATGCGCC GTCGAGCTAT CATCTCTCGG TCGTGGTCGA CGATGCCGTG
CAAGGTGTCA CCCACATCGT GCGCGGCCGC GATCTTTATC ACGCAACATC CGTGCATCGC
CTGCTGCAGC GCCTTCTTGA GCTTCCGGAG CCGGTCTACC ACCATCACCG TCTTATCCTC
GGCCCGGACG GACGGAAACT GTCAAAGAGC AACCGCGACA CCGGCATTGC CGCTTTTCGG
GCTGCCGGGC ACGGGCCTGC AGATATCAGG GCGATGGTTC TCGGCGAGCA ATGA
|
|---|
| Protein sequence | MPISRPEQPV FRFAPSPNGF LHLGHALSAI INHDIAADSG GRFLLRIEDI DRTRCRPEFE
AAILDDLAWL ELEWEEPVRR QSDHLDLYAS ALEHLKAMRL VYPSAMTRGE IRAAVAASEA
KGSAWPRDPD GTPLYPGRER GFRPDDQAAI LASGRPYAWR LDMEEAVKRA GGSLSWQEKG
FRGSGEYSQI ADPAAWGDVV LSRSDAPSSY HLSVVVDDAV QGVTHIVRGR DLYHATSVHR
LLQRLLELPE PVYHHHRLIL GPDGRKLSKS NRDTGIAAFR AAGHGPADIR AMVLGEQ
|
|---|
| |