Gene Smed_2483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2483 
Symbol 
ID5323344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2566791 
End bp2567969 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content62% 
IMG OID640791421 
Producthypothetical protein 
Protein accessionYP_001328150 
Protein GI150397683 
COG category[R] General function prediction only 
COG ID[COG3970] Fumarylacetoacetate (FAA) hydrolase family protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.111578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAG GATTTCTGGT GAGTTTCGAA CGGGCGCTGA GCGCCGAATA TATTCAGCCC 
GCCGACGCAT CCAGCGCGAT GCTCGTCGGG CGCGTCTGGT CCAAAACCGC CGGCGGACCC
TGTCCGGTCC TGATCAAGGG CGGAGAGGTG TTCGACCTGA CCCCGATAGC GGCAACGATC
TCGGCGCTTC TCGAGATCGA CGGGCTGGCG GACGCTTTGC GCGATTCCAC GCGCTTTGCG
AGTCTCGGCT CTCTCGACGC GTTCCTCACG GGCGAGGCGG GCGATCTTCT CGCGCCAGCC
GATCTGCAGG CCGTCAAGGC GGCTGGCGTC ACCTTTGCGG ACAGCATGCT GGAGCGCGTG
ATCGAGGAAC AGGCCAAGGG CGATCCGCTG CGTGCGCAGG AGATCCGCGG CCGGCTGGCG
CCCGTCCTCG GCGACAATCT CAAGGGCCTC GTCGCCGGTT CGCAGAAGGC CGCCGAGGTC
AAGAAACTGC TCCAGGAACT CGGTCTTTGG TCGCAATACC TCGAAGTGGG TATCGGTCCC
GACGCCGAAA TCTTCACCAA GGCGCAGCCT ATGTCTTCGG TCGGCTGTGG TGCGGATATC
GGCATCCACC CCAAATCCGA CTGGAACAAT CCCGAGCCGG AGGTGGTCCT GGCCGTCACG
TCGAAGGGCA AGATCGTCGG CGCCACACTC GGCAATGACG TCAATCTTCG CGATTTCGAA
GGACGTTCCG CACTGCTCCT CAGCAAGGCC AAGGACAATA ATGCGTCCTG CTCGATCGGC
CCTTTCATCC GGCTCTTCTA CGGCGATTTC ACGATTGAGG ACGTAAAGCA GGCGGAGGTC
TCCCTCGTCG TCGACGGCAG GGAAGGGTTC AGGATGACCG GCGTCAGTCC GATGTCTGCG
ATCAGCCGCA GCCCTGAAGA TCTGGTTTCG CAGCTTCTGA ATGACAACCA TCAGTATCCT
GACGGGGTCG TTTTCTTCCT CGGGACCATG TTTGCGCCGG TGAAGGATCG TCGAGGCGCG
GGACTTGGTT TCACGCATGA AATCGGAGAC AGGGTCGAGA TTTCGACCCC GCATCTCGGG
CGACTCGTAA ACTGGGTCGA TCACAGCGAC CGCTGCCCGA AATGGAGTTT CGGCATCGGC
GCTCTGATGA AGAATCTTGC CGCGCGCGGG CTCTTGTAG
 
Protein sequence
MSGGFLVSFE RALSAEYIQP ADASSAMLVG RVWSKTAGGP CPVLIKGGEV FDLTPIAATI 
SALLEIDGLA DALRDSTRFA SLGSLDAFLT GEAGDLLAPA DLQAVKAAGV TFADSMLERV
IEEQAKGDPL RAQEIRGRLA PVLGDNLKGL VAGSQKAAEV KKLLQELGLW SQYLEVGIGP
DAEIFTKAQP MSSVGCGADI GIHPKSDWNN PEPEVVLAVT SKGKIVGATL GNDVNLRDFE
GRSALLLSKA KDNNASCSIG PFIRLFYGDF TIEDVKQAEV SLVVDGREGF RMTGVSPMSA
ISRSPEDLVS QLLNDNHQYP DGVVFFLGTM FAPVKDRRGA GLGFTHEIGD RVEISTPHLG
RLVNWVDHSD RCPKWSFGIG ALMKNLAARG LL