Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2483 |
Symbol | |
ID | 5323344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2566791 |
End bp | 2567969 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791421 |
Product | hypothetical protein |
Protein accession | YP_001328150 |
Protein GI | 150397683 |
COG category | [R] General function prediction only |
COG ID | [COG3970] Fumarylacetoacetate (FAA) hydrolase family protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.111578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGAG GATTTCTGGT GAGTTTCGAA CGGGCGCTGA GCGCCGAATA TATTCAGCCC GCCGACGCAT CCAGCGCGAT GCTCGTCGGG CGCGTCTGGT CCAAAACCGC CGGCGGACCC TGTCCGGTCC TGATCAAGGG CGGAGAGGTG TTCGACCTGA CCCCGATAGC GGCAACGATC TCGGCGCTTC TCGAGATCGA CGGGCTGGCG GACGCTTTGC GCGATTCCAC GCGCTTTGCG AGTCTCGGCT CTCTCGACGC GTTCCTCACG GGCGAGGCGG GCGATCTTCT CGCGCCAGCC GATCTGCAGG CCGTCAAGGC GGCTGGCGTC ACCTTTGCGG ACAGCATGCT GGAGCGCGTG ATCGAGGAAC AGGCCAAGGG CGATCCGCTG CGTGCGCAGG AGATCCGCGG CCGGCTGGCG CCCGTCCTCG GCGACAATCT CAAGGGCCTC GTCGCCGGTT CGCAGAAGGC CGCCGAGGTC AAGAAACTGC TCCAGGAACT CGGTCTTTGG TCGCAATACC TCGAAGTGGG TATCGGTCCC GACGCCGAAA TCTTCACCAA GGCGCAGCCT ATGTCTTCGG TCGGCTGTGG TGCGGATATC GGCATCCACC CCAAATCCGA CTGGAACAAT CCCGAGCCGG AGGTGGTCCT GGCCGTCACG TCGAAGGGCA AGATCGTCGG CGCCACACTC GGCAATGACG TCAATCTTCG CGATTTCGAA GGACGTTCCG CACTGCTCCT CAGCAAGGCC AAGGACAATA ATGCGTCCTG CTCGATCGGC CCTTTCATCC GGCTCTTCTA CGGCGATTTC ACGATTGAGG ACGTAAAGCA GGCGGAGGTC TCCCTCGTCG TCGACGGCAG GGAAGGGTTC AGGATGACCG GCGTCAGTCC GATGTCTGCG ATCAGCCGCA GCCCTGAAGA TCTGGTTTCG CAGCTTCTGA ATGACAACCA TCAGTATCCT GACGGGGTCG TTTTCTTCCT CGGGACCATG TTTGCGCCGG TGAAGGATCG TCGAGGCGCG GGACTTGGTT TCACGCATGA AATCGGAGAC AGGGTCGAGA TTTCGACCCC GCATCTCGGG CGACTCGTAA ACTGGGTCGA TCACAGCGAC CGCTGCCCGA AATGGAGTTT CGGCATCGGC GCTCTGATGA AGAATCTTGC CGCGCGCGGG CTCTTGTAG
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Protein sequence | MSGGFLVSFE RALSAEYIQP ADASSAMLVG RVWSKTAGGP CPVLIKGGEV FDLTPIAATI SALLEIDGLA DALRDSTRFA SLGSLDAFLT GEAGDLLAPA DLQAVKAAGV TFADSMLERV IEEQAKGDPL RAQEIRGRLA PVLGDNLKGL VAGSQKAAEV KKLLQELGLW SQYLEVGIGP DAEIFTKAQP MSSVGCGADI GIHPKSDWNN PEPEVVLAVT SKGKIVGATL GNDVNLRDFE GRSALLLSKA KDNNASCSIG PFIRLFYGDF TIEDVKQAEV SLVVDGREGF RMTGVSPMSA ISRSPEDLVS QLLNDNHQYP DGVVFFLGTM FAPVKDRRGA GLGFTHEIGD RVEISTPHLG RLVNWVDHSD RCPKWSFGIG ALMKNLAARG LL
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