Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2437 |
Symbol | |
ID | 5323298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2517192 |
End bp | 2518064 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791375 |
Product | putative beta-lactamase precursor protein |
Protein accession | YP_001328104 |
Protein GI | 150397637 |
COG category | [V] Defense mechanisms |
COG ID | [COG2367] Beta-lactamase class A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.651142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATAGGC TAGGCAATTC CGGCTCGGTA AAAGAGAGAC TTGCGGAAAT CTGCGATGCG CAGCCTTTCG TGACGCGTTT CCTCGTCCGC AATCTCAAGA CGGGCGAGAC GATCGAACGC GGCGCGGAGG AGGAAACGCC TTCCGCCAGC ACCCGTAAGA CCTCCATCAT GATGGCGGCG CTGAAGGCGG TGCACGAGCG GCGGCTCGAC CTCGAAGAGC CGATCACCTA CGAAGCCCGC TTTGCCGAGG AAGTGGCAAG CGGCATGTTC CGCTACCTCA CGCCCGGAAT CGTGATTTCG TTGCGCGATG CGATTACCGG AATGATGGTG CTGAGCGACA ATGTCTGCAC CAGGATGGTG TTCGAGCGGC TGACGCTGGA GGAGGTCGAC TGCTACTGCA AGTCGATCGG CATGAAAGGC ACGCATCATC GCTTTCTCAT TCCGCCCTTG GCTCTGCCGC CGGATCATGC GCTGACCTCG GTGACGACCA CGACTGCCCG CGACCAGGCC TTTCTGCTGC AGACGATCCT GGACGCGCAG GCCTCTCCCG AAGCGGCCGC AAAGCTCGGC ACGTCACCGG AGCTCTGCGC CTATGCCCTG CAGACTCTCA AGAACCAGAT CCTGCGCTAC GCAATTCCGT CGCGCCTGCC TTTCGGCACG GTGGTGGCGC ATAAGGGCGG CACGGGCAAG CGCGGCCGCA TGAATGCCGG CATCGTCTAT CGCGACGGCG CTCCCTTCTA CATCATCTGC GCCTATACCG ATGACGTGCC GCAGGTCATG CCGGACGGCA CGCCGGGTTA CACGGTGGCG CTCGAGACCA TCGGCAGGCT CTCGCGGGCC TGCTGGGACG GATTCAGTCA TAACGATCAA TAA
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Protein sequence | MDRLGNSGSV KERLAEICDA QPFVTRFLVR NLKTGETIER GAEEETPSAS TRKTSIMMAA LKAVHERRLD LEEPITYEAR FAEEVASGMF RYLTPGIVIS LRDAITGMMV LSDNVCTRMV FERLTLEEVD CYCKSIGMKG THHRFLIPPL ALPPDHALTS VTTTTARDQA FLLQTILDAQ ASPEAAAKLG TSPELCAYAL QTLKNQILRY AIPSRLPFGT VVAHKGGTGK RGRMNAGIVY RDGAPFYIIC AYTDDVPQVM PDGTPGYTVA LETIGRLSRA CWDGFSHNDQ
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