Gene Smed_2437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2437 
Symbol 
ID5323298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2517192 
End bp2518064 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content62% 
IMG OID640791375 
Productputative beta-lactamase precursor protein 
Protein accessionYP_001328104 
Protein GI150397637 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.651142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATAGGC TAGGCAATTC CGGCTCGGTA AAAGAGAGAC TTGCGGAAAT CTGCGATGCG 
CAGCCTTTCG TGACGCGTTT CCTCGTCCGC AATCTCAAGA CGGGCGAGAC GATCGAACGC
GGCGCGGAGG AGGAAACGCC TTCCGCCAGC ACCCGTAAGA CCTCCATCAT GATGGCGGCG
CTGAAGGCGG TGCACGAGCG GCGGCTCGAC CTCGAAGAGC CGATCACCTA CGAAGCCCGC
TTTGCCGAGG AAGTGGCAAG CGGCATGTTC CGCTACCTCA CGCCCGGAAT CGTGATTTCG
TTGCGCGATG CGATTACCGG AATGATGGTG CTGAGCGACA ATGTCTGCAC CAGGATGGTG
TTCGAGCGGC TGACGCTGGA GGAGGTCGAC TGCTACTGCA AGTCGATCGG CATGAAAGGC
ACGCATCATC GCTTTCTCAT TCCGCCCTTG GCTCTGCCGC CGGATCATGC GCTGACCTCG
GTGACGACCA CGACTGCCCG CGACCAGGCC TTTCTGCTGC AGACGATCCT GGACGCGCAG
GCCTCTCCCG AAGCGGCCGC AAAGCTCGGC ACGTCACCGG AGCTCTGCGC CTATGCCCTG
CAGACTCTCA AGAACCAGAT CCTGCGCTAC GCAATTCCGT CGCGCCTGCC TTTCGGCACG
GTGGTGGCGC ATAAGGGCGG CACGGGCAAG CGCGGCCGCA TGAATGCCGG CATCGTCTAT
CGCGACGGCG CTCCCTTCTA CATCATCTGC GCCTATACCG ATGACGTGCC GCAGGTCATG
CCGGACGGCA CGCCGGGTTA CACGGTGGCG CTCGAGACCA TCGGCAGGCT CTCGCGGGCC
TGCTGGGACG GATTCAGTCA TAACGATCAA TAA
 
Protein sequence
MDRLGNSGSV KERLAEICDA QPFVTRFLVR NLKTGETIER GAEEETPSAS TRKTSIMMAA 
LKAVHERRLD LEEPITYEAR FAEEVASGMF RYLTPGIVIS LRDAITGMMV LSDNVCTRMV
FERLTLEEVD CYCKSIGMKG THHRFLIPPL ALPPDHALTS VTTTTARDQA FLLQTILDAQ
ASPEAAAKLG TSPELCAYAL QTLKNQILRY AIPSRLPFGT VVAHKGGTGK RGRMNAGIVY
RDGAPFYIIC AYTDDVPQVM PDGTPGYTVA LETIGRLSRA CWDGFSHNDQ