Gene Smed_2389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2389 
Symbol 
ID5323250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2464905 
End bp2465738 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content64% 
IMG OID640791327 
Producturease accessory protein UreD 
Protein accessionYP_001328056 
Protein GI150397589 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0829] Urease accessory protein UreH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.274527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCGG CAGCGGCGAT TGCCCCTCAG CGGGCATGGG GAAAAGGACG GCTCGTCGCC 
AAGACCGGAG GGGCGCGCAC GCGCATCGCC GGTCTCTATC AGGAAGGTTG CGCCAAGATC
CGCTTGCCAA GGACCTTCGA CGCATCGATG GAGGCCGTGC TCATCAATTC GTCGGGCGGC
GTGACCGGTG GCGACCGGCT CGCTTGGGAG TTCGAGGCGG GCGAGGGCAC CAACCTCACG
CTGACGACAC AGGCCTGCGA GAAGGTTTAC AAGGCGAGTG TGGACACGGC CGTGGTTGCG
ACGCGCATTT CGGTCGCTGC CCGCGGCCAC GTCGACTGGC TGCCGCAGGA GTCAATCCTG
TTTGATCGGT CGGCCCTGTC ACGCTCTTTG GAGGTCGATC TCGCTCCTGA TGCGTCCTTT
CTTGCGCTGG AGGCGGTTCT GATCGGCCGG AAGGCCATGG GAGAGACGGT GCGGTCCGGC
CTCTTCCGCG ATCATTGGCG CATTCGCAGC GGTGGAGCGC TGGTCCACGC GGAAAATCTT
GCATTAGCCG GCGATATCGC GGCGCTAGGG TCGCGGCGAG CCGTGCTCGA CGGCGCGGTC
GCCTTTGCAA CCCTCGTCTA TGTCGCCCCT GATTGCGAGG CCCTGCTCCC GAGATTGCGG
ACATCGCTTG CGGAACATGC CCTCTCGGGC GTCAGCCATT TTGCCGTTAA CGGGCGCGAC
AAGATCGTCG CCCGCGTGGT TGCGGCCGAC GGGTTCGCGC TCAGAAAAAT TCTGATCCCA
CTGATTTCGC ACTTGCGTAA AGGCGCATCT GTGCCGAGAG TCTGGACTCT CTGA
 
Protein sequence
MEAAAAIAPQ RAWGKGRLVA KTGGARTRIA GLYQEGCAKI RLPRTFDASM EAVLINSSGG 
VTGGDRLAWE FEAGEGTNLT LTTQACEKVY KASVDTAVVA TRISVAARGH VDWLPQESIL
FDRSALSRSL EVDLAPDASF LALEAVLIGR KAMGETVRSG LFRDHWRIRS GGALVHAENL
ALAGDIAALG SRRAVLDGAV AFATLVYVAP DCEALLPRLR TSLAEHALSG VSHFAVNGRD
KIVARVVAAD GFALRKILIP LISHLRKGAS VPRVWTL