Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2376 |
Symbol | |
ID | 5323237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2456829 |
End bp | 2457509 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791314 |
Product | CRP/FNR family transcriptional regulator |
Protein accession | YP_001328043 |
Protein GI | 150397576 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.253524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACCT CGCGACTGAC TTCGAACGAC AGGGCCGTGC TTCTCGGTTC GCGTCTTTTC GCAAACCTGC CGGCACCCGC CGCCGAAGCT GTTCTTGAAG GCGCCACCAT TTCAAGACAC GAGGCGCAGG ATGTTCTTTT CCATCAGGGC GACGCCATCG AGCACGTCTT CTTCGTCGTC TCCGGCCTCG TGCGTCTCTA CGGCACCGGC AAGGGCGGGC GCGAGGCGGA CATCGCCGTG TTTCCCAGGG GCGCGCTTTT CGGCGAAAAG GCCGTCTTCC TTGATCAGCG CGCAACCGCA CACGCGCAAG CCGTGCACCC GTCCATTATC GCGAAGCTGG ACGGCCCGAG GCTTTGCCGG CTTGTCCGCG AAGAGGCCGA TGTGGCGTGG GCGCTCCTAG AACTCCTCTG CCGTCATGGG CAGATGACGG AAAAGCGCCT TGCCGAGGAT CGATTGCTGA CCGCACCGCA GCGTGTCGCA AACTACATCC TCGGCCAGTG CCCGGGCGAC TCACCGGCCT TCACCTTCCG GCTTCCATTT CAAAAGAATG TGCTGGCAGG CAAGCTCGGG CTTGCGCCGG AGGCGCTCTC GCGCGCCTTC TCGACCCTGC GGCAGTCGGG CGTCATCGTG AAGGGCCGCC TGATCGAAAT CCGCGATAGA GAGGCACTGG AGCGATTCTG A
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Protein sequence | MKTSRLTSND RAVLLGSRLF ANLPAPAAEA VLEGATISRH EAQDVLFHQG DAIEHVFFVV SGLVRLYGTG KGGREADIAV FPRGALFGEK AVFLDQRATA HAQAVHPSII AKLDGPRLCR LVREEADVAW ALLELLCRHG QMTEKRLAED RLLTAPQRVA NYILGQCPGD SPAFTFRLPF QKNVLAGKLG LAPEALSRAF STLRQSGVIV KGRLIEIRDR EALERF
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