| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2374 |
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| Symbol | |
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| ID | 5323235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2452181 |
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| End bp | 2453368 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791312 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001328041 |
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| Protein GI | 150397574 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.347836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAGA AAATCCTGCC CCTCGTCGGC GCTTGTGCAG CGATTCTCAT CTGCGCCCTT
GTGAGCGCTT CGGCCGAGGA GGCCGCCAAG CCGCAGCAAA AGCAGGCGCC GCCATCCATC
GTCGTGACCG AAGCGAGGGA ACGGTCGATC ACCGACCGCG TCATCGCCAC CGGATCGATC
GAGGCGGTGG ACGAGATTTA TGTCTCTCCC CTGGTCGAAG GTCTTGCCAT CCGGTCGCTC
GATGTCGACG TCGGCGATCG CGTGGAAGAA GGCAGCACGA TGGCCTCGCT CAACCAGGAC
GCGCTGCTCC TGCAGAGAAG CCAGCTCGAG GCCAACCTTG CAAAGGCCGA GGCGTCGCTC
GCGCAACTGC ACGCCCAGCT CGCCGAGGTG ACGGCCAATT CGGAGGAGGC GACGCGTGTC
GCCAACCGTG CCGTGCAGCT GTCGGAAAAT GGTACCGTTT CGACGGCCGA AGCCGACCGC
TTGAAAGCGC TTGCCGCGGC CGGGCGAGCA CGCGTCCGCT CGGCGGAGCA GTCGGTGAGC
GTCGCAACGG CAGACATCAA GGTGGTAAAG ACGCAAATCG ACGACGTCGA CCTGCGCCTC
GCCCGCACCG CAGTGAAGGC GCCGGTCAGC GGCATTGTCT CGCGGAAGAA CGCGAAGGTC
GGTGCGATCG CCAGCGGCAG CGGCGAGCCG TTGTTCGCGA TCATCCGCGA CGGAGAAATC
GAGATGACGG CCGACATTGC CGAGTCCGAT GTCATCAAGC TTGCCGTGGG GCAGCCCGCG
ACGGTCAAGC TTGCCGGCAG CACCACCACG ATCGACGGGA AGATTCGGCT GATCGCGCCG
ACCGTCGACC CGCAGACCCG GCTCGGCACC GTTCATATCA GCCTGAACGA TCCGTCGAAG
GCACGCGCCG GCATGTACGC AAGCGCCGTC ATCGTGGCGG AGCAGAAGCA GACTGTGGTT
TTGCCGCAAA CAGCCGTTAC ATCGGAAGAC GGCAAATCGA TTGTCCGCAA GGTCGAAGAT
GGCATCGTGC GTCTGGTACC CGTGGAAACG GGTATCCAGG ACGGACAGTT CATCGAGATT
CTCTCCGGCA TCAAGCCCGG TGAGCAGGCG GTGGCGAAGG CCGGTGCCTA TGTGCGCGAT
GGCGACCGCA TCAATCCGGT CGAATCCGCT GAGCCGGCAA CCAACTGA
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| Protein sequence | MAQKILPLVG ACAAILICAL VSASAEEAAK PQQKQAPPSI VVTEARERSI TDRVIATGSI
EAVDEIYVSP LVEGLAIRSL DVDVGDRVEE GSTMASLNQD ALLLQRSQLE ANLAKAEASL
AQLHAQLAEV TANSEEATRV ANRAVQLSEN GTVSTAEADR LKALAAAGRA RVRSAEQSVS
VATADIKVVK TQIDDVDLRL ARTAVKAPVS GIVSRKNAKV GAIASGSGEP LFAIIRDGEI
EMTADIAESD VIKLAVGQPA TVKLAGSTTT IDGKIRLIAP TVDPQTRLGT VHISLNDPSK
ARAGMYASAV IVAEQKQTVV LPQTAVTSED GKSIVRKVED GIVRLVPVET GIQDGQFIEI
LSGIKPGEQA VAKAGAYVRD GDRINPVESA EPATN
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