Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2372 |
Symbol | |
ID | 5323233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2449692 |
End bp | 2450561 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640791310 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001328039 |
Protein GI | 150397572 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.239724 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTTG CCGCTCTCGC CGGCGCAATC CTCTTCTGGC TCGCGGCCTG GGCCCTCAAC CAATGGCTGG TCCAAAAGCG GTTCGCAAGC AACGTCGCGA ACAATGCGGC ACATCTCGCC GTGCCGCTCC TCTTCGGCAT CACCATACTC GTGCTCTGGG AAGGCATCGT CCGCGGCTTC GCCGTTCCAT CGGTGCTGCT GCCGGCGCCA TCGATGATCT GGCTGCGGCT GATAAATTCG CTGCCGACGC TGGCCGCGGA CTTCCGGCAG ACCTTCCTGA AATCCGTGCT GACCGGCTAC GCCCTCGGCT GCGGCCTCGG CTTCATCGTC GCCATCCTCA TCGACCGTTC GCCCTTCCTG CAGAAGGGCC TTCTGCCGCT CGGCAACTTC GTCTCCGCCC TCCCCGTCAT CGGAGTAGCC CCGATCATGG TCATGTGGTT CGGCTTCGAC TGGCCGTCGA AGGTCGCGGT CGTCGTCATC ATGACCTTCT TCCCGATGCT GGTGAACACC GTTTCCGGCC TGGCAGCCGC GAGTCACATG GAGCGCGACC TGATGCGGAC TTACGCGGCT TCCTGGTGGC AGACGCTCCT CAAGCTCCGC TTGCCGGCCG CCTGGCCTTT CATTTTCAAC GCTCTCAAGA TTAACTCCAC CTTGGCCCTG ATCGGTGCGA TCGTGGCCGA GTTCTTCGGA ACGCCCATCG TCGGCATGGG TTTCCGCATC TCCACGGAAG TGGGCCGCAT GAATGTCGAC ATGGTCTGGG CCGAAATCGC CGTCGCGGCG GTGGCTGGCT CGGCCTTTTA CGGGGTCGTC GCGCTTGCCG AGCGAGCCGT CACCTTCTGG CATCCGTCCA TCCGAAGTGG CCGGGCCTGA
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Protein sequence | MNLAALAGAI LFWLAAWALN QWLVQKRFAS NVANNAAHLA VPLLFGITIL VLWEGIVRGF AVPSVLLPAP SMIWLRLINS LPTLAADFRQ TFLKSVLTGY ALGCGLGFIV AILIDRSPFL QKGLLPLGNF VSALPVIGVA PIMVMWFGFD WPSKVAVVVI MTFFPMLVNT VSGLAAASHM ERDLMRTYAA SWWQTLLKLR LPAAWPFIFN ALKINSTLAL IGAIVAEFFG TPIVGMGFRI STEVGRMNVD MVWAEIAVAA VAGSAFYGVV ALAERAVTFW HPSIRSGRA
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