Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2322 |
Symbol | |
ID | 5323183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2403389 |
End bp | 2404156 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640791260 |
Product | ABC transporter related |
Protein accession | YP_001327989 |
Protein GI | 150397522 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.888289 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGG CCGTATCCGT CGAAAATCTG AGCGTCGTCT TCGACGAGTT CAAAGCACTC GATGCCGTCA GCGTGGATGT AGGGAAGGGG AAATCCTTCG GGCTCGTCGG CGAGTCCGGC TCGGGAAAGT CCACCCTGTT GCGCGCCGTC GCCGGCCTCA CTGGCGCAAG CAAAGGCGCG ATCCGCGTTT CGGGCCGCGA GGTTCGTGGG ACGCGTCGTG ACAAGGCCTT TTATCGGGCG GTGCAAATGG TGTTCCAGGA TCCTTACGGT TCGCTGCATC CGCGCCAGAC GGTCGACCGG CAGCTGATGG AGCCTCTGGC GATCCACGGT ATCGGCGACA GCGAGCGCCG CATCCTGAAG GCCCTGGACG AGGTGGGCCT TGGTTCAAGT TTCCGCTTCC GCTATCCGCA TCAGCTCTCC GGCGGACAGC GCCAGCGCAT CGCGATCGCA CGCGCGCTTA TCCTGGAGCC CTCGATCCTG CTCCTGGACG AGCCGACCTC GGCGCTCGAT GCGTCCGTGC AGGCGGAAGT GCTCAACCTC CTCGAAGAGG TGCGGCGCGA CCGCGGCCTG ACCTTCATCA TGGTGAGCCA CGATCTCGGC GTCGTCACCC ATATGTGCGA ACGGCTGGCC GTCATGCAGA ACGGCCGCGT GGTGGAGCGG CTTACCTCGG CGGATCTGGT GGCCGGGCGT ATCGCGGAGG CGTATACGCG CAATCTCATG GTCGCGAGCA AAGGGTTCAG GCGGGAAGCG GTGGCGCAAA GCGGGTAG
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Protein sequence | MTEAVSVENL SVVFDEFKAL DAVSVDVGKG KSFGLVGESG SGKSTLLRAV AGLTGASKGA IRVSGREVRG TRRDKAFYRA VQMVFQDPYG SLHPRQTVDR QLMEPLAIHG IGDSERRILK ALDEVGLGSS FRFRYPHQLS GGQRQRIAIA RALILEPSIL LLDEPTSALD ASVQAEVLNL LEEVRRDRGL TFIMVSHDLG VVTHMCERLA VMQNGRVVER LTSADLVAGR IAEAYTRNLM VASKGFRREA VAQSG
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