Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2149 |
Symbol | |
ID | 5323009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2218647 |
End bp | 2219084 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640791087 |
Product | ribose-5-phosphate isomerase B |
Protein accession | YP_001327817 |
Protein GI | 150397350 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCG CGATTGGAGC CGACAGCGCC GGTAAGCCCC TGCTCGACGT CATCGCCGCG CATCTCGCCA CGAAAAGCGG CCTCGAAGTG AAGGACCTGA GCCAGTCCGG CTATTATGCC GATCTCTCCC GAGATCTGGC GCAGACGATC ACGGCAGGCG AAAACGAGCG TGGCATCCTG ATCTGCGGTA CCGGCATTGG CGTATGCATC TCCGCCAACA AGGTGCCCGG CATCCGCGCC GCGCTTACCC ACGACACCTA TTCGGCCGAG CGGGCAGCCA AGTCCAATAA TGCCCAGATC ATCACCATGG GCGCACGCGT TATCGGCCCG GAATTGGCGA AATCGATCGT CGACACCTGG CTTGCCTCCG AATTCGACCC GAACGGGCCG TCTGCGGCGA ATGTCGACGC GATCGATCGT CTGGATGCGG TGAAGTAA
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Protein sequence | MKIAIGADSA GKPLLDVIAA HLATKSGLEV KDLSQSGYYA DLSRDLAQTI TAGENERGIL ICGTGIGVCI SANKVPGIRA ALTHDTYSAE RAAKSNNAQI ITMGARVIGP ELAKSIVDTW LASEFDPNGP SAANVDAIDR LDAVK
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