| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2092 |
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| Symbol | |
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| ID | 5322952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2151601 |
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| End bp | 2152929 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640791030 |
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| Product | D-serine dehydratase |
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| Protein accession | YP_001327760 |
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| Protein GI | 150397293 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3048] D-serine dehydratase |
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| TIGRFAM ID | [TIGR02035] D-serine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.962214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0544874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTTC AGCTCCCGAA TGATCCGGCC CGTAGCGATG TGCTTTCAGC CCGCCCGACC
CTTTGGATCA ATTCTCTGTA CCGCGACGAT GCAATCGGCG ATACCTGCCT GCCGCTCGTT
CCCGATCAGG TCGATGTGGC ACAGTCTGAC TGGGAGCGCC TGGCGCCGCT CCTCGAGACC
TGTTTCCCCG AATTGAAGAA GACAGCGGGT GCAATACGCT CCGACCTGAC AGAATTGCAC
GCGCTTCGTG AGGCGCTTGG TTATGGCGGC GGCGAGTTCG GCCGGGTCTT CGCTAAGGCA
GACAGCGCGC TCCCGGTAGC GGGTTCGATC AAGGCACGCG GCGGCGTCTA CGAAGTCTTC
GTTTTCGCCG AAGAACTGGC CAGGCGCGAG GGCCTTATCG GGGACCGGGA GGATATTCGT
CATCTGGCCA GCGCCGAAGC CCGGGCATTT TTCTCCAGCT ATTCGATCGC CGTAGGCAGC
ACTGGCAATC TGGGGCTCAG CGTTGGAGTC GCCGCGCGTG CTCTTGGCTT CGAAGCAACG
GTTCACATGT CATCGGATGC GAAACCGTGG AAGGTGGAGC GATTGAGAAA GCTCGGCGTG
AAGGTCGTAC AGCACGAGGC CGACTACACC ACGGCGGTGG AGAACGCCCG CAGCGCGGCA
GAGGACGACC CGGCGGTCTA CTTCGTCGAC GATGAGCAAT CCCGACGCCT GTTTCTCGGT
TACAGCGTTG CCGCGTCGGA ACTCGTGGAT CAGCTTCAAA CGTTTGGTGT TGCCGTCGAC
GCCGACCGTC CTCTGTTCCT TTATCTGCCT TGCGGCATCG GCGGTGCCCC CGGCGGCGTG
ACCTATGGTG CCAAAAAGGT GTTCGGCGAC AATGCGCATT GCTTCTTTGT GGAGCCTGTC
CAGTCGCCTT GCGCTCTCGT CCATATGATG AGTGGTTCCG AGGAACTCGT CTCGGTCTAT
GATGTCGGGC TGACGAACAG CACGGAGGCG GACGGCATGG CCGTCGCGCG GATGTCGGCC
TTCGTTGCGA CAGTCATGCG GAACATGCTG GCAGGGGTCT TCACCGTTGA CGATGCGTCT
CTCTTTCGCT GGCTGCTCCT TGCCCACGAG GTCCAGGGTC TTCGCCTGGA GCCTTCTGCG
GCCGCGGGTT TTGCGGGGCC GGGCTTTATC GTGAAGCATC CGCAGGGGCG GGCATTCTGC
GAACGGCTGA AGCTGTCTGA TCGCTTGCGG CAGGCAACGC ATGTGGTCTG GACGACAGGA
GGATCGTTTG TGCCGCAGGA GCAGTTCGAC CAATTCCTGG AAATTGCTCA GGCCTCCAGA
TCACGATGA
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| Protein sequence | MTLQLPNDPA RSDVLSARPT LWINSLYRDD AIGDTCLPLV PDQVDVAQSD WERLAPLLET
CFPELKKTAG AIRSDLTELH ALREALGYGG GEFGRVFAKA DSALPVAGSI KARGGVYEVF
VFAEELARRE GLIGDREDIR HLASAEARAF FSSYSIAVGS TGNLGLSVGV AARALGFEAT
VHMSSDAKPW KVERLRKLGV KVVQHEADYT TAVENARSAA EDDPAVYFVD DEQSRRLFLG
YSVAASELVD QLQTFGVAVD ADRPLFLYLP CGIGGAPGGV TYGAKKVFGD NAHCFFVEPV
QSPCALVHMM SGSEELVSVY DVGLTNSTEA DGMAVARMSA FVATVMRNML AGVFTVDDAS
LFRWLLLAHE VQGLRLEPSA AAGFAGPGFI VKHPQGRAFC ERLKLSDRLR QATHVVWTTG
GSFVPQEQFD QFLEIAQASR SR
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