| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2008 |
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| Symbol | |
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| ID | 5322867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2057495 |
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| End bp | 2059273 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640790945 |
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| Product | acetolactate synthase 3 catalytic subunit |
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| Protein accession | YP_001327676 |
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| Protein GI | 150397209 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.901977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGAA CTGAGAACCA GATGACGGGC GCGGAGATCG TTCTCCAGGC TTTGAAAGAC
AATGGCGTCG AACACATCTT CGGCTATCCC GGCGGCGCCG TGCTTCCAAT CTACGACGAG
ATTTTCCAGC AGGAGGACAT ACAGCACATC CTCGTCCGCC ACGAGCAGGG CGCCGGCCAC
ATGGCCGAAG GGTATGCCCG CTCCACCGGC AAGGTCGGCG TCATGCTGGT GACATCCGGC
CCGGGGGCGA CCAATGCGGT TACCCCGCTG CAGGACGCGC TGATGGACTC CATCCCTCTC
GTCTGCATCT CGGGGCAGGT ACCGACATCG CTGATCGGTT CTGACGCCTT CCAGGAGTGC
GACACGGTCG GAATTACGCG GCCTTGCACC AAGCACAACT GGCTGGTCAG GGACGTCAAC
GAACTCGCCC GCGTCATCCA CGAAGCTTTC CGCGTCGCCC AGTCGGGCCG CCCCGGACCG
GTCGTCGTCG ACATTCCGAA GGACATCCAG TTTGCGACCG GTGCCTATAC GCCGCCTTCG
GCCGTTCCAA CGCAGAAGAG CTATCAGCCG AAAACCCAGG GCGACCTGAA GAAGATCGAG
GAGGCGGTTG CGCTCATGAA GTCCGCGCGC CAGCCGGTTA TCTATTCGGG CGGCGGCGTC
ATCAATTCCG GCCCGCAAGC CGCACATTTC CTGCGCGAGC TGGTCGAACT CACCGATTTT
CCGATCACGT CGACGCTGAT GGGCCTCGGC GCCTATCCTG CCTCCGGCAA GAACTGGCTT
GGCATGCTCG GCATGCATGG AACCTATGAA GCCAATCTCG CCATGCACGA TTGTGACGTC
ATGATCTGCA TAGGAGCGCG CTTTGACGAC CGTATCACCG GCCGGCTCAA TGCCTTCTCG
CCGAATTCAA AGAAGATCCA CATCGATATC GACCCGTCCT CGATCAACAA GAACGTCCGT
GTCGACGTTC CGATCATCGG CGACGTCGCC GCAGTCCTCG AGGACATGGT TCGCCTGTGG
CGTGCTGCGG CCAAGACCGT CGACCGGACG CGGCTCGAGG ATTGGTGGAA ATCGATCACC
AAGTGGCGCG CGCGCAATTC GCTCGCCTAT ACGCCGAGTG CCGATGTCAT CATGCCGCAA
TATGCGATCC AGCGGCTTTA CGAGCTCACC AAGGACCGCG ACACCTACAT CACCACCGAA
GTGGGACAGC ACCAGATGTG GGCGGCGCAG TTCTTCGGAT TCGAGGAGCC GAACCGGTGG
ATGACGTCGG GCGGCCTCGG CACCATGGGC TACGGCTTCC CGGCCGCCGT GGGCGTTCAG
GTTGCGCATC CGGATAGCCT CGTCATCGAT ATCGCGGGCG ACGCCTCGAT CCAGATGTGC
ATCCAGGAAA TGTCCTGCGC GGTTCAGTAC GGCCTGCCGG TCAAGATCTT CATCCTGAAC
AATCAATATA TGGGCATGGT CCGGCAGTGG CAGCAACTGC TCCACGGCAA CCGACTGTCG
CATTCCTATA CCGAGGCGAT GCCTGACTTC GTCAAGCTCG CCGAGGCCTA TGGCGGCGTT
GGCATCCGTT GCGAAAAGCC GGGAGAGCTC GACGAAGCAA TCAAGCAGAT GATCGATACT
CCGGCTCCGG TCATTTTCGA TTGCCGAGTC GCAAATCTCG CCAATTGCTT CCCGATGATC
CCCTCGGGCA AGGCGCATAA CGAAATGCTG CTCCCCGACG AGGCCACGGA CGAGGCGGTT
GCCAACGCCA TCGACGCCAA GGGCCGCCAG CTCGTTTGA
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| Protein sequence | MSGTENQMTG AEIVLQALKD NGVEHIFGYP GGAVLPIYDE IFQQEDIQHI LVRHEQGAGH
MAEGYARSTG KVGVMLVTSG PGATNAVTPL QDALMDSIPL VCISGQVPTS LIGSDAFQEC
DTVGITRPCT KHNWLVRDVN ELARVIHEAF RVAQSGRPGP VVVDIPKDIQ FATGAYTPPS
AVPTQKSYQP KTQGDLKKIE EAVALMKSAR QPVIYSGGGV INSGPQAAHF LRELVELTDF
PITSTLMGLG AYPASGKNWL GMLGMHGTYE ANLAMHDCDV MICIGARFDD RITGRLNAFS
PNSKKIHIDI DPSSINKNVR VDVPIIGDVA AVLEDMVRLW RAAAKTVDRT RLEDWWKSIT
KWRARNSLAY TPSADVIMPQ YAIQRLYELT KDRDTYITTE VGQHQMWAAQ FFGFEEPNRW
MTSGGLGTMG YGFPAAVGVQ VAHPDSLVID IAGDASIQMC IQEMSCAVQY GLPVKIFILN
NQYMGMVRQW QQLLHGNRLS HSYTEAMPDF VKLAEAYGGV GIRCEKPGEL DEAIKQMIDT
PAPVIFDCRV ANLANCFPMI PSGKAHNEML LPDEATDEAV ANAIDAKGRQ LV
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