| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1974 |
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| Symbol | |
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| ID | 5322833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2024258 |
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| End bp | 2025802 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640790912 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001327643 |
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| Protein GI | 150397176 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTTCC CCGCGGACCG GGCCGGCGCG CGTGCCTTTA CGGGGCGAAT ACCGAGGCGA
CCGCTCTTGC GCCGGCTGCA GCCTCCATGC AACATCCATA CATTGAACAA TCGCAAGGTT
TCGATGAACG AGGATCGCGT TGAGGTTTCC TGGGTGCCGG CGCTCGGCAG AGCGAAGGGG
CCTCTTTATC TTGCCATTGC AGACGAGATC GCCGCCGACA TCGCCGCAGG CCGGCTGGCA
AACGGCATGC GCCTGCCGCC GCAACGGGTT CTGGCGGCGG CGCTCGGTAT CGACTTTACC
ACCGTCAGCC GCGCCTACAA CGAAGCGCGT CGGCGCGGCT TGGTCGAGGG CCGCGTGGGG
CAGGGTACCT ATGTCAGGAC CCGTGAGAGG AGTTCGGGCC GTCCGTCAGC GGATCGCCTC
GCGGCTGGTC TTGTCGACAT GAGCATGAAT CTGCCGCCGC TCTTCGACGA CCCGGCTCTG
TCGGCGAAAA TGTGGGCGGA TGTCGGGGCA CTCGGTCATG GCGGGCTTGA CCAGCGGAGC
CCTGAACTGT TGATGCGCTA TCAGCCCGTC GGCGGCACGG AGCGGGACAG GTCTGCAGGG
GCGGCCTGGC TCAAGCCGCG GCTCGGTGGA CTTCAGGCCG ATCGGATGGT CGTCTGCACG
GGCGCGCAAG GAGCATTGCT TGCGAGCGTC GGCATGCTGG CGACGAAGGG TGACAGGGTC
TGCGCCGAAG CGCTGGCCTA TCCGGGCCTC CGTTCGCTGG CCGCCTATCT GGGCATCGAA
CTCGTCAGTG TTGGGATCGA CCGCAACGGG ATCTTGCCCG AAGCCTTCGA GGAGGCGTGC
GTCCTCCATA GGCCGAAGGC TCTCTATTGT AATCCCACGC TTCACAATCC GACGACCGCC
ACGCTCCCGC TCGATCGCCG CGAAGCTATC GTGGAGATCG CACGCCGCCA CGGCGTAGCC
ATTATCGAGG ACGACGCCTA CGGGGCCTTG CCCGCAAGTC CCGTTCCGCC ATTGGCCGCG
CTCGCGCCTG ACCTCGTCTA TCATGTCGCA GGTCTTGCCA AGTGCCTCTC GCCGGCGCTT
CGCATCGCCT ATCTGGTCGC GCCTGACCGA TCGGCGGCCA TCCGCCTGGA AGGCGCGGTT
CGGGCGACGG CCGGGATGAC GTCGCCTCTT TCGGTCGCCA TCGCAACGCG TTGGCTGGAG
GAAGGAACGG CGCAGGCGGT CCTGGACGCA ATCCGCACCG AGGCCGGCGC ACGCCAGCAG
ATCGCGAGCA GGAGCCTCGA GGGCGCGGAC CTTTCGAGCG ATCGCGAGGG CTTCCATCTC
TGGCTGAAGC TTCCTTCCGG CTGGAATCGC GGTGAGTTTA CCGCACAGTT GCGAGCGGCC
GGGATCGGCG TCGTCGCAAG CGATGCCTTT GCGATATCGG ATCCACCCGA AGCTGTGCGG
CTCGGTCTCG GCGCCGCCCG AACGCGCGAT GACCTGCGGG AGAGTCTTGA CGTCATCGCC
GGCCTTCTTG CCCGCTCGCC GGCTGCACAC AATCTCATTG TCTGA
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| Protein sequence | MPFPADRAGA RAFTGRIPRR PLLRRLQPPC NIHTLNNRKV SMNEDRVEVS WVPALGRAKG
PLYLAIADEI AADIAAGRLA NGMRLPPQRV LAAALGIDFT TVSRAYNEAR RRGLVEGRVG
QGTYVRTRER SSGRPSADRL AAGLVDMSMN LPPLFDDPAL SAKMWADVGA LGHGGLDQRS
PELLMRYQPV GGTERDRSAG AAWLKPRLGG LQADRMVVCT GAQGALLASV GMLATKGDRV
CAEALAYPGL RSLAAYLGIE LVSVGIDRNG ILPEAFEEAC VLHRPKALYC NPTLHNPTTA
TLPLDRREAI VEIARRHGVA IIEDDAYGAL PASPVPPLAA LAPDLVYHVA GLAKCLSPAL
RIAYLVAPDR SAAIRLEGAV RATAGMTSPL SVAIATRWLE EGTAQAVLDA IRTEAGARQQ
IASRSLEGAD LSSDREGFHL WLKLPSGWNR GEFTAQLRAA GIGVVASDAF AISDPPEAVR
LGLGAARTRD DLRESLDVIA GLLARSPAAH NLIV
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