Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1958 |
Symbol | |
ID | 5322817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2010166 |
End bp | 2010855 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640790896 |
Product | ErfK/YbiS/YcfS/YnhG family protein |
Protein accession | YP_001327627 |
Protein GI | 150397160 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.160415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.267267 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATGA GCCAGGAGTT CCCGAAGATA TCTGTCGGCC GCCGCAAATT TGGAAAGGCG CTGCTTCTCC TCGGTTTTTG CCTTATTCCG CTTGCAGCGC TTGCCCAGAC ACAGATCTAC GATTCCAAGA CAAAGAAATG GGTGAACTAC GACAAGAGGA AAGCGCGACA GTATTTCTCG CGAAACAATC AGGTTCCCGA GGCCTTTCGC CGACAGATGG TGCCGTTTCG CACGGCGGAA GTTCCGGGCA CGATTATCAT CGATGGCAAC CAGCATTTCC TCTATCTGGT CCAGCCGGGT GGTCAGGCGA TTCGCTACGG CATCGGTGTG GGCCGCGAAG GTTTCGGTTG GGCGGGTATC GTCCGGGTGG GGCGCAGGGC CGAGTGGCCG ACCTGGACGC CCCCGGCCGA AATGGTCGCA CGCGATCCGA ATGCGGCAAA ATGGGCAGGC GGCATGCCCG GCGGACCGGA CAATCCGCTG GGCGCCCGAG CGCTTTACCT TTACGAGGGC GATAGCGATA CGATCTACCG CATCCATGGT ACGGTGGAGC CCTGGACGAT CGGTCTCGAC GTCTCCTCCG GCTGTATAAG AATGAACAAT GACAATATCA TCGACCTGTA TTCGCGCGTC GACGTGGGCG CGAAGGTCAT CGTGCTGATG CAGGGGGCCG CGCTCTACAA GGGCGTGTGA
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Protein sequence | MTMSQEFPKI SVGRRKFGKA LLLLGFCLIP LAALAQTQIY DSKTKKWVNY DKRKARQYFS RNNQVPEAFR RQMVPFRTAE VPGTIIIDGN QHFLYLVQPG GQAIRYGIGV GREGFGWAGI VRVGRRAEWP TWTPPAEMVA RDPNAAKWAG GMPGGPDNPL GARALYLYEG DSDTIYRIHG TVEPWTIGLD VSSGCIRMNN DNIIDLYSRV DVGAKVIVLM QGAALYKGV
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