Gene Smed_1954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1954 
Symbol 
ID5322813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2005887 
End bp2006936 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content64% 
IMG OID640790892 
Productaldo/keto reductase 
Protein accessionYP_001327623 
Protein GI150397156 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.464115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0603236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATATC GTCAGCTCGG CCGATCCGGC CTCAAGATCT CGACCATCAC CATGGGCACG 
ATGACGATCG GCGGTGGCGG CAAGTTCGCC CAGGTCGGCG ACGTCGGTGT CGCGGATGCC
AGCCGCCATG TCGACCTCTG CCTGGATGCC GGCGTCAACC TCATCGATAC GGCCGACATC
TATTCAACCG GCGTCTGCGA GGAGATTATC GGCGAGGTTC TTGGCGGAAA GCGCAAGGAC
GGCGTGCTGA TCGCCACAAA AGCACGCTTC TCCATGGGGC CGGGTCCGAA CGACGGCGGC
CTTTCGCGCC ACCACCTGAT CAGTGCCTGC GAGGCGAGCC TCAAGCGCTT GAAGACCGAT
GTGATCGACC TATACCAGGT GCATGAATGG GACGGCCAGA CGCCGCTCGA GGAAACGATG
GAAGCGCTCG ATACACTCGT GCGGCAGGGC AAAGTTCGCT ATATCGGCTG CTCCAACTAT
TCGGGCTGGC ATATAATGAA GGCCCTCGGC GTCAGCGCCC TCGATAAACG CCAGCGTTTC
GTCAGCCAGC AGATTCACTA CACGCTGGAA GCCCGCGAGG CCGAGTACGA GCTGGTCCCG
ATTTCGATCG ATCAGGGCCT TGGCATTCTC GTCTGGAGCC CGCTCGCCGG CGGCCTTCTT
TCAGGAAAGC ACAGGCGTGG CCAGTCGCCG GAAGGCACAC GCCAGCTCGC CGGCTGGAAC
GAGCCGCCGA TCCGCGACGA GGAACGGCTG TGGAAAATCG TCGACATCCT GGTGGCGATC
GCGGCCGAAC GCGGCGTGTC ACCGGCGCAG GTCGCCCTCG CCTGGCTGAT CGGCCGCCAG
GCCGTCACCT CCGTCATCAT CGGTGGTCGA ACCGAGCAAC AGTTCCGCGA CAATCTCGCC
GCCGCCGGCC TGAGGCTCAC CGAAGAGGAA CGCGAGCTCC TCGAGGCCGT AAGCCGGCCG
CCGGTCATCT ATCCGTACTG GCATCAGCTC TGGACCGCAA AGGACCGGCT CGGCAAAGCC
GACCTCTCGC TTCTCGGACC GCATGTGTGA
 
Protein sequence
MEYRQLGRSG LKISTITMGT MTIGGGGKFA QVGDVGVADA SRHVDLCLDA GVNLIDTADI 
YSTGVCEEII GEVLGGKRKD GVLIATKARF SMGPGPNDGG LSRHHLISAC EASLKRLKTD
VIDLYQVHEW DGQTPLEETM EALDTLVRQG KVRYIGCSNY SGWHIMKALG VSALDKRQRF
VSQQIHYTLE AREAEYELVP ISIDQGLGIL VWSPLAGGLL SGKHRRGQSP EGTRQLAGWN
EPPIRDEERL WKIVDILVAI AAERGVSPAQ VALAWLIGRQ AVTSVIIGGR TEQQFRDNLA
AAGLRLTEEE RELLEAVSRP PVIYPYWHQL WTAKDRLGKA DLSLLGPHV