Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1954 |
Symbol | |
ID | 5322813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2005887 |
End bp | 2006936 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640790892 |
Product | aldo/keto reductase |
Protein accession | YP_001327623 |
Protein GI | 150397156 |
COG category | [C] Energy production and conversion |
COG ID | [COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.464115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0603236 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAATATC GTCAGCTCGG CCGATCCGGC CTCAAGATCT CGACCATCAC CATGGGCACG ATGACGATCG GCGGTGGCGG CAAGTTCGCC CAGGTCGGCG ACGTCGGTGT CGCGGATGCC AGCCGCCATG TCGACCTCTG CCTGGATGCC GGCGTCAACC TCATCGATAC GGCCGACATC TATTCAACCG GCGTCTGCGA GGAGATTATC GGCGAGGTTC TTGGCGGAAA GCGCAAGGAC GGCGTGCTGA TCGCCACAAA AGCACGCTTC TCCATGGGGC CGGGTCCGAA CGACGGCGGC CTTTCGCGCC ACCACCTGAT CAGTGCCTGC GAGGCGAGCC TCAAGCGCTT GAAGACCGAT GTGATCGACC TATACCAGGT GCATGAATGG GACGGCCAGA CGCCGCTCGA GGAAACGATG GAAGCGCTCG ATACACTCGT GCGGCAGGGC AAAGTTCGCT ATATCGGCTG CTCCAACTAT TCGGGCTGGC ATATAATGAA GGCCCTCGGC GTCAGCGCCC TCGATAAACG CCAGCGTTTC GTCAGCCAGC AGATTCACTA CACGCTGGAA GCCCGCGAGG CCGAGTACGA GCTGGTCCCG ATTTCGATCG ATCAGGGCCT TGGCATTCTC GTCTGGAGCC CGCTCGCCGG CGGCCTTCTT TCAGGAAAGC ACAGGCGTGG CCAGTCGCCG GAAGGCACAC GCCAGCTCGC CGGCTGGAAC GAGCCGCCGA TCCGCGACGA GGAACGGCTG TGGAAAATCG TCGACATCCT GGTGGCGATC GCGGCCGAAC GCGGCGTGTC ACCGGCGCAG GTCGCCCTCG CCTGGCTGAT CGGCCGCCAG GCCGTCACCT CCGTCATCAT CGGTGGTCGA ACCGAGCAAC AGTTCCGCGA CAATCTCGCC GCCGCCGGCC TGAGGCTCAC CGAAGAGGAA CGCGAGCTCC TCGAGGCCGT AAGCCGGCCG CCGGTCATCT ATCCGTACTG GCATCAGCTC TGGACCGCAA AGGACCGGCT CGGCAAAGCC GACCTCTCGC TTCTCGGACC GCATGTGTGA
|
Protein sequence | MEYRQLGRSG LKISTITMGT MTIGGGGKFA QVGDVGVADA SRHVDLCLDA GVNLIDTADI YSTGVCEEII GEVLGGKRKD GVLIATKARF SMGPGPNDGG LSRHHLISAC EASLKRLKTD VIDLYQVHEW DGQTPLEETM EALDTLVRQG KVRYIGCSNY SGWHIMKALG VSALDKRQRF VSQQIHYTLE AREAEYELVP ISIDQGLGIL VWSPLAGGLL SGKHRRGQSP EGTRQLAGWN EPPIRDEERL WKIVDILVAI AAERGVSPAQ VALAWLIGRQ AVTSVIIGGR TEQQFRDNLA AAGLRLTEEE RELLEAVSRP PVIYPYWHQL WTAKDRLGKA DLSLLGPHV
|
| |