Gene Smed_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1953 
Symbol 
ID5322812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2005176 
End bp2005850 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content61% 
IMG OID640790891 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001327622 
Protein GI150397155 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.428029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0851297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCA CGCTCTATCT TCATCCGCTT GCGTCTTTCT GCCACAAGGT GCTCGTTGCG 
CTTTACGAGG CGGGCACGTC GTTCACGCCG CAGATCGTGG ATTTCGGAGA CCCCAGTGAG
CATGCGCGCT ATCTGGAGGT CTGGCCCGTG GGCAAGATCC CCGTGTTGCA CGACGATGCG
CGCGGCAGAA CGGTGCCGGA AAGCTCGGTA ATCATCGAAT ATCTCGACCA GCATTACCCC
GGGGAACAAC CGCTGATCCC ACGCGATGAG GCGCTGGCAC TCGAAGCGCG GCTCTGGGAT
CGCTTCTTCG ATCTCTACGT TCAGGTGCCG ATGCAGAAGA TCGTCACCGA TACGCTACGG
GCCTCCGGCG AAAACGATGG CCGCGGCGTC GCCGATGCGC AAGCGGCGCT TGCAAGCGCG
TATGATCTTG CCGAACGGCA CTTCCACGAC CGGCTTTTCG CAGTTGGAGA AGATTTTTCG
ATTGCCGACT GCGCCGCCGC TCCCGCCCTC TTCTATGCCG GGATCGTGGT GCCGTTCGAC
GACACTCATC CGAACCTTGC GGCATATTTC GAGCGGCTGC TTGCGCGTGC CTCCTTCCAG
CGCGCACTGG CCGAAGCCCG GCCTTATTTC CCGCTGTTCC CCTATAGGGA TGCGATACCC
CCGAGATTCC TCTAA
 
Protein sequence
MTLTLYLHPL ASFCHKVLVA LYEAGTSFTP QIVDFGDPSE HARYLEVWPV GKIPVLHDDA 
RGRTVPESSV IIEYLDQHYP GEQPLIPRDE ALALEARLWD RFFDLYVQVP MQKIVTDTLR
ASGENDGRGV ADAQAALASA YDLAERHFHD RLFAVGEDFS IADCAAAPAL FYAGIVVPFD
DTHPNLAAYF ERLLARASFQ RALAEARPYF PLFPYRDAIP PRFL