Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1953 |
Symbol | |
ID | 5322812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2005176 |
End bp | 2005850 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640790891 |
Product | glutathione S-transferase domain-containing protein |
Protein accession | YP_001327622 |
Protein GI | 150397155 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.428029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0851297 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCA CGCTCTATCT TCATCCGCTT GCGTCTTTCT GCCACAAGGT GCTCGTTGCG CTTTACGAGG CGGGCACGTC GTTCACGCCG CAGATCGTGG ATTTCGGAGA CCCCAGTGAG CATGCGCGCT ATCTGGAGGT CTGGCCCGTG GGCAAGATCC CCGTGTTGCA CGACGATGCG CGCGGCAGAA CGGTGCCGGA AAGCTCGGTA ATCATCGAAT ATCTCGACCA GCATTACCCC GGGGAACAAC CGCTGATCCC ACGCGATGAG GCGCTGGCAC TCGAAGCGCG GCTCTGGGAT CGCTTCTTCG ATCTCTACGT TCAGGTGCCG ATGCAGAAGA TCGTCACCGA TACGCTACGG GCCTCCGGCG AAAACGATGG CCGCGGCGTC GCCGATGCGC AAGCGGCGCT TGCAAGCGCG TATGATCTTG CCGAACGGCA CTTCCACGAC CGGCTTTTCG CAGTTGGAGA AGATTTTTCG ATTGCCGACT GCGCCGCCGC TCCCGCCCTC TTCTATGCCG GGATCGTGGT GCCGTTCGAC GACACTCATC CGAACCTTGC GGCATATTTC GAGCGGCTGC TTGCGCGTGC CTCCTTCCAG CGCGCACTGG CCGAAGCCCG GCCTTATTTC CCGCTGTTCC CCTATAGGGA TGCGATACCC CCGAGATTCC TCTAA
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Protein sequence | MTLTLYLHPL ASFCHKVLVA LYEAGTSFTP QIVDFGDPSE HARYLEVWPV GKIPVLHDDA RGRTVPESSV IIEYLDQHYP GEQPLIPRDE ALALEARLWD RFFDLYVQVP MQKIVTDTLR ASGENDGRGV ADAQAALASA YDLAERHFHD RLFAVGEDFS IADCAAAPAL FYAGIVVPFD DTHPNLAAYF ERLLARASFQ RALAEARPYF PLFPYRDAIP PRFL
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