Gene Smed_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1748 
Symbol 
ID5322606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1827860 
End bp1828645 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content61% 
IMG OID640790686 
Producthypothetical protein 
Protein accessionYP_001327418 
Protein GI150396951 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.179176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACGACC TCGCCCTCCA CATCCTTTTC TTTCTCTTCG CTGCGGCATT CCTTGCCGGC 
TTCATCGATT CGATCGCCGG CGGTGGGGGG ATGATCACCA TTCCGGCCAT GCTGATTGCG
GGGATTCCTC CGCTCGAAAC GCTCGGCACC AACAAGCTGC AGTCCCTGTT CGGCTCCGGC
TCTGCGAGCA TCGCCTACGC CCGGCACGGC CACGTCAACC TCAGGGAGCA ACTTCCTATG
GCGCTGATGT CGGCGGCCGG CGCCGTATTG GGCGCATTGC TTGCGACGGT CGTTCCCGCC
GACATACTGG AGGCGGTGCT GCCCTTCCTG TTGATCGGAA TTGCGCTCTA CTTCGGTTTC
AAACCTGATG TCGGCGACAT CGACAAACAC CGGCGGCTGT CGGTTTTCCT GTTCACCATA
ACCTTCGTCC CCCTGATCGG CCTCTATGAC GGCGTTTTTG GTCCGGGCAC GGGCTCTTTC
TTTATGCTCG GTTTCGTCTC GCTGGCCGGG TACGGCATTC TGAAGGCGAC GGCGCATACC
AAGTTTCTGA ACTTCGGTTC CAATATCGGT GCATTCTTCG TCTTTCTGCT GAGCGGCGTC
GTGCTCTGGA AGGTGGGGCT GACGATGGGT GTCGGGCAAT TCCTGGGCGC GCAGGTCGGC
TCCCGCTATG CGATGGCCAA GGGTGCAAAG ATCATCAAGC CGTTGCTGGT GATCGTGTCC
ATCGCGCTCG CCATCCGGCT GCTGGCCGAT CCGGCGCATC CACTGCGGGT CTGGGTGGGG
CTGTAG
 
Protein sequence
MHDLALHILF FLFAAAFLAG FIDSIAGGGG MITIPAMLIA GIPPLETLGT NKLQSLFGSG 
SASIAYARHG HVNLREQLPM ALMSAAGAVL GALLATVVPA DILEAVLPFL LIGIALYFGF
KPDVGDIDKH RRLSVFLFTI TFVPLIGLYD GVFGPGTGSF FMLGFVSLAG YGILKATAHT
KFLNFGSNIG AFFVFLLSGV VLWKVGLTMG VGQFLGAQVG SRYAMAKGAK IIKPLLVIVS
IALAIRLLAD PAHPLRVWVG L