Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1723 |
Symbol | |
ID | 5322581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1802441 |
End bp | 1803202 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640790661 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_001327393 |
Protein GI | 150396926 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.186177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGATG TCAGCTTCCA GCTTTACAGC GCCCGAAATT TCCCGCCCTT TGCCGAAGTC CTCTCTGCCA TCGGTTCTGC GGGCTACACG CAGGTCGAGG GTTACGGAGC CCTTTACGCG GCACTCTCTG ATGCGGAGAT CGCCGAGTTC AAGGCCGGAC TCGACCGCAA CGGCCTATCC ATGCCGACAG CCCATTTCGG CTTGGACATG CTGGAGGGCA ATCCGTCCCG CGTTCTGCAG ATCGCCGAGT CGCTCGGCAT TCGCGCTATC TATTGCCCCT ACCTGATGCC GGATCAGCGC CCGAGCGATG CGACCGGCTG GCGGGCCTTC GGGGGCCGTC TGCAGGCGGC CGGTAAGCCG TTCCGCGATG CCGGCCTCGA TTTCGGTTGG CACAATCACG ACTTCGAGTT TCACGCGCTC GCCGACGGCT CGGTGCCGCT CGACCAGATC TTGGCAGGCG GTCCCGACCT TTCCTGGGAA GCCGATATCG CCTGGATCGT GCGCGGCGGA GCGGATCCAT TCGCCTGGAT CTCGAAATAT GGCCCCCGCA TCACGGCGGT CCACGTCAAG GATATCGCGC CTAAGGGCGA GAAGGCGGAC GAGGACGGTT GGGCCGATGT CGGGGAGGGG ACGCTCGACT GGAAGGCACT GATACAGGCG CTTTCCAGGA CGTCGGCGAA ATATTTCATC GCCGAACACG ACAATCCCAG CGATTTCCGG CGTTTCGCCA AGCGCTCGCT GGCCTCTATT CAATCCTACT GA
|
Protein sequence | MKDVSFQLYS ARNFPPFAEV LSAIGSAGYT QVEGYGALYA ALSDAEIAEF KAGLDRNGLS MPTAHFGLDM LEGNPSRVLQ IAESLGIRAI YCPYLMPDQR PSDATGWRAF GGRLQAAGKP FRDAGLDFGW HNHDFEFHAL ADGSVPLDQI LAGGPDLSWE ADIAWIVRGG ADPFAWISKY GPRITAVHVK DIAPKGEKAD EDGWADVGEG TLDWKALIQA LSRTSAKYFI AEHDNPSDFR RFAKRSLASI QSY
|
| |