Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1681 |
Symbol | |
ID | 5322539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1762667 |
End bp | 1763488 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640790621 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001327353 |
Protein GI | 150396886 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0641945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.147127 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTTGAAC CGATTTCCCA AGAGCATTTT TCAACGCTGA AGCGGACCGT CGTGCTGCCG AACGCGCTCC GGCTCGCGTA TATCGAGATG GGCGACCCCA ACGGCGTGCC CATCCTCCTG CTCCATGGTT TTACCGACAG CGCCCGAAGC TGGAGCCTCG CCGCACCATA TCTGGCGCCG GGTTTTCGCG TCGTAGCCGC AGACCTGCGG GGCCATGGGA ATTCCGACCA GCCTGAGGGC TGCTACACTA TTCCCGAGCT GGCGAATGAT GTCCGGTTGC TGATGGTGGC CTTGGACCTT GCGCCGTGCC ACCTAGTCGG CCATTCGCTT GGTGGACGGC TTGTGCAAGC GCTCGCTGAG CGGTGGCCCC ATCTCGTCCG AAAAATCGTT CTTATGTCGA CCTCCGCCGC ACTGCGCGAG CGTCAGGGAT GGTTGTGGGA AAACATCCAG ATGCTCAGCG ATCCGATCGA TCCAGAAAGC GCATTCATCC GGGAATGGTG CTCTGGCGCA GGTCTGATCG ACGTGGATTT TCTGGCCCAT GCGCGACGCG AAAGCGCCGC CCTTCCGTCA AGAATCTGGC ATTCGATCTA TTACGAGCAG CTTGCCTACG ATCCGTCGCC GCTTTTGCAG GATATTTCCG CGGCGACGCT CATCCTGCGG GGCGAGAAGG ACACGATCGC GACTGAGGAA CATCAGGTCC AGATGAAAGA CGCGATCGCC GGCGCGGAGA TCATTTCTCT TCCCGAGCAC GGCCATAACA TCCATTGGGA AGCCCCCGAA AAGGTGGCCC ACTTGATTTT GACGTTTCTC GATCGTCCGT GA
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Protein sequence | MVEPISQEHF STLKRTVVLP NALRLAYIEM GDPNGVPILL LHGFTDSARS WSLAAPYLAP GFRVVAADLR GHGNSDQPEG CYTIPELAND VRLLMVALDL APCHLVGHSL GGRLVQALAE RWPHLVRKIV LMSTSAALRE RQGWLWENIQ MLSDPIDPES AFIREWCSGA GLIDVDFLAH ARRESAALPS RIWHSIYYEQ LAYDPSPLLQ DISAATLILR GEKDTIATEE HQVQMKDAIA GAEIISLPEH GHNIHWEAPE KVAHLILTFL DRP
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