Gene Smed_1681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1681 
Symbol 
ID5322539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1762667 
End bp1763488 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content60% 
IMG OID640790621 
Productalpha/beta hydrolase fold 
Protein accessionYP_001327353 
Protein GI150396886 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0641945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.147127 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTGAAC CGATTTCCCA AGAGCATTTT TCAACGCTGA AGCGGACCGT CGTGCTGCCG 
AACGCGCTCC GGCTCGCGTA TATCGAGATG GGCGACCCCA ACGGCGTGCC CATCCTCCTG
CTCCATGGTT TTACCGACAG CGCCCGAAGC TGGAGCCTCG CCGCACCATA TCTGGCGCCG
GGTTTTCGCG TCGTAGCCGC AGACCTGCGG GGCCATGGGA ATTCCGACCA GCCTGAGGGC
TGCTACACTA TTCCCGAGCT GGCGAATGAT GTCCGGTTGC TGATGGTGGC CTTGGACCTT
GCGCCGTGCC ACCTAGTCGG CCATTCGCTT GGTGGACGGC TTGTGCAAGC GCTCGCTGAG
CGGTGGCCCC ATCTCGTCCG AAAAATCGTT CTTATGTCGA CCTCCGCCGC ACTGCGCGAG
CGTCAGGGAT GGTTGTGGGA AAACATCCAG ATGCTCAGCG ATCCGATCGA TCCAGAAAGC
GCATTCATCC GGGAATGGTG CTCTGGCGCA GGTCTGATCG ACGTGGATTT TCTGGCCCAT
GCGCGACGCG AAAGCGCCGC CCTTCCGTCA AGAATCTGGC ATTCGATCTA TTACGAGCAG
CTTGCCTACG ATCCGTCGCC GCTTTTGCAG GATATTTCCG CGGCGACGCT CATCCTGCGG
GGCGAGAAGG ACACGATCGC GACTGAGGAA CATCAGGTCC AGATGAAAGA CGCGATCGCC
GGCGCGGAGA TCATTTCTCT TCCCGAGCAC GGCCATAACA TCCATTGGGA AGCCCCCGAA
AAGGTGGCCC ACTTGATTTT GACGTTTCTC GATCGTCCGT GA
 
Protein sequence
MVEPISQEHF STLKRTVVLP NALRLAYIEM GDPNGVPILL LHGFTDSARS WSLAAPYLAP 
GFRVVAADLR GHGNSDQPEG CYTIPELAND VRLLMVALDL APCHLVGHSL GGRLVQALAE
RWPHLVRKIV LMSTSAALRE RQGWLWENIQ MLSDPIDPES AFIREWCSGA GLIDVDFLAH
ARRESAALPS RIWHSIYYEQ LAYDPSPLLQ DISAATLILR GEKDTIATEE HQVQMKDAIA
GAEIISLPEH GHNIHWEAPE KVAHLILTFL DRP