Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1657 |
Symbol | |
ID | 5322515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1746510 |
End bp | 1747415 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640790597 |
Product | peptidase S49 |
Protein accession | YP_001327329 |
Protein GI | 150396862 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.954617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.14225 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGAACT ATCCCGAAAT CGCCAGTCGG ATGTTCGGCA CGCCGCTGAT GCTGCATCCG TCGAAGGGCG ACATCATTGC GCGGGCTTTC GGTCCGCGCG TGCTTGGCAG TCCGGACGCT CCGGCGCACG TCGCCGGCGG CGAAGAGATG GGGCTCCTTG GCGATAAGCT GCGCAATGCG ACCGACTGGG ACGGAGAGCG CATCTACCCC GGTCCGGATC TTGTCGCGTC CGGCATTGCG CTCATCGAGA TCGAGGGCTC TCTCGTGAAC AAGGGCAAGT GGATCGGCAA GTCCTGCGGC ATGACCAGCT ACGAAGCGAT CGGAGTGCAG GTCCGGGATT GCATCGAGCG CGACGACATC AAGGCCGTCG TGTTCGAGGT CGACAGCTAT GGCGGCGAGG TGACCGGCGC CTTCGATTGC GCCGAGCTGA TCTTCGAGCT TTCGCAGGTG AAGCCCACCA TCGCGGTCCT CACGGACCAT GCCTGCTCGG CCGGTTATCT GCTGGCCTCG CCCTGCCGTC AGCTGGTCAT TCCGCAGACC GGTATTTGCG GCTCGATCGG CGTCATCTCG ATGCATGTCG ATATGAGCGC CTGGCTCGCG AAGGAGGGCC TGAAGGTCAC CATCCTGAAG GCCGGCGAGC ACAAGGCCGA CTTCAATCCT TACGAGGCCA TCCCGGACGA TGTGCTTCAG CAGGAACTCG CCGAGCTCGA GGAGCTTCGC GTCGAATTCG CAGCCACCGT CGCGCGGTAC CGCGCCGGCC GGCTGACACA GCAATCCGCT CTCGCCACTG AGGCGCGGGT CTATCGCGGA CAGAAGGCGG TTGATGCCGG CCTCGCCGAC GCGGTTGCAC GCCCTTCGCA GGTTCTCGAA GCCTTCGAAG CTGAACTGAG CCGGACAGCC GGCTAA
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Protein sequence | MRNYPEIASR MFGTPLMLHP SKGDIIARAF GPRVLGSPDA PAHVAGGEEM GLLGDKLRNA TDWDGERIYP GPDLVASGIA LIEIEGSLVN KGKWIGKSCG MTSYEAIGVQ VRDCIERDDI KAVVFEVDSY GGEVTGAFDC AELIFELSQV KPTIAVLTDH ACSAGYLLAS PCRQLVIPQT GICGSIGVIS MHVDMSAWLA KEGLKVTILK AGEHKADFNP YEAIPDDVLQ QELAELEELR VEFAATVARY RAGRLTQQSA LATEARVYRG QKAVDAGLAD AVARPSQVLE AFEAELSRTA G
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