| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1503 |
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| Symbol | |
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| ID | 5322361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1583967 |
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| End bp | 1585385 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640790450 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001327182 |
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| Protein GI | 150396715 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0921845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACTT GGCTGCCAGA CATCGAACAG GGCCACGGCC CGCTTTACGC GCGCATCGCC
GACCAGATTG AAGAGGCGAT AGGCAACGGC ACCCTGCCCG TCGGCACGAA GTTGCCGCCC
CAACGCAATC TTGCATTCGA TGTCGGCGTG ACGATCGGCA CGATCGGACG CGCCTATGGG
ATTGTCCGCG AGCGAGGCCT GGTCAGCGGC GAGGTCGGGC GCGGTACCTA CGTTCTCGAC
CACCCGGAGA GCCGGCCGCC GGAACAGTCG GACCCGCTGA CGACGTCGCT GTCAGGGACG
CGCCCGCTCA TCGCCCCTGC CGGAAAGCTC CGCTTCGACA GCACGGCCGC GCCCGACATA
GGACAGGGTG ACATTCTGGC TAGATTGCTC AGCGAGATCA GCCGCGAGCA TCATCGGGAC
ATTGCGAGCT ATGCCCGCAA TTTTCCAGAG CATTGGTTCG AGGCAGGGTC TCAATGGCTC
GCACGGGAGA GCTTCCGCCC GGCGCCGGAA ACGGTGGTTC CGACGCTCGG CGCCCACGCC
GCAGTCGTCG CGGTAATCTC CGCCGTCACC TCGCCTGGCG ATCGCATTGC CTTCGAGACT
CTGACCTACT CCCAGATCAG CCGCAGCGCA GGCCTCATCG GCCGGCGGAT CGCACTGGTC
GAGAGCGACG AGTTCGGAAT GCGGCCGGAA GACTTCGAGC GCGTCTGCGC ACAACAGCAC
CCGAAACTCG CCTTTCTCAT GCCCGGCGCC CAGAATCCGA CCGTCGCCGT CATGCCCCTC
GACCGGCGCC GGGCGATTGC CGATATAGCG CGCAAGTACG GCGTCTGGCT GATCGAGGAC
AACCTCTACG GCTCGATGAT CGGAGACCCG CTTCCGCTGC TCGTGGAGCT TGCGCCCGAG
CGGACTTTTC TTGTCGGCGG GCTCTCGAAG TCCGTTGCAG CCGGCGTACG CGGCGGCTGG
GTCGCTTGCC CGCCGCATTT CAGTCAACGT ATTCGCGTGG CCCATAAGAT GGTGAGCGGC
GGCCTGCCTT TCATTCTCGC AGAACTATGC GCCCGCCTGG TCCTCTCGGG ATCCGCATCC
GTATTGCGTA ATCGCGGCGT GGAGGAAATC GGTGCGCGCG TAGCGTTGGC TCGCGAAATC
TTTTCCGGGT TCGAGTTCAA CTCGCATTCC AAGATCCCGT TTTTCTGGCT GAAACTGCCC
GAGCCGTGGC TTTCCGGAAC ATTCAAGCAG GCCGCTCTTC AGGAAGGCGT GCTCATCGAC
GACGAGGACG AGTTCAAGGC CGGACGTTCC GACCGGGTTT TCCATCGCAT CCGCGTCGGC
TTCTCCTCTC CCGTCGACCG ATCGGAGGTG AAGCGAGGCT TCGACGTTCT GCGGCGTCTG
CTCGACAGTG GACGCGTCGG ATACGACAGT TTCGATTGA
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| Protein sequence | MTTWLPDIEQ GHGPLYARIA DQIEEAIGNG TLPVGTKLPP QRNLAFDVGV TIGTIGRAYG
IVRERGLVSG EVGRGTYVLD HPESRPPEQS DPLTTSLSGT RPLIAPAGKL RFDSTAAPDI
GQGDILARLL SEISREHHRD IASYARNFPE HWFEAGSQWL ARESFRPAPE TVVPTLGAHA
AVVAVISAVT SPGDRIAFET LTYSQISRSA GLIGRRIALV ESDEFGMRPE DFERVCAQQH
PKLAFLMPGA QNPTVAVMPL DRRRAIADIA RKYGVWLIED NLYGSMIGDP LPLLVELAPE
RTFLVGGLSK SVAAGVRGGW VACPPHFSQR IRVAHKMVSG GLPFILAELC ARLVLSGSAS
VLRNRGVEEI GARVALAREI FSGFEFNSHS KIPFFWLKLP EPWLSGTFKQ AALQEGVLID
DEDEFKAGRS DRVFHRIRVG FSSPVDRSEV KRGFDVLRRL LDSGRVGYDS FD
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