| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1481 |
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| Symbol | |
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| ID | 5322339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1567144 |
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| End bp | 1568760 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640790429 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase |
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| Protein accession | YP_001327161 |
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| Protein GI | 150396694 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0303] Molybdopterin biosynthesis enzyme
[COG2068] Uncharacterized MobA-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.475919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00908696 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGGTTCG GACCTGTGCG GCCTGCGGAT GCCGAAGGCG CTCTTCTCGG CCATTCGGTA
AAGATCGGCA CAGTGAAGCT ATCGAAGGGA CATCGCCTGA ACCCCGACGA TGTCGCGGCG
CTTGCAGAAG CGGATGTAAC GGAGGTCATT GTCGCGGTGC TCGAGCCCGA CGACCTGCCT
GAGGACGAAG CCGCGTCACG CATAGCGGCC GCCATCGCCC CGGATCATCT GCGATTCTCG
CGGGCGGCGA CCGGCCGGGT CAACATCTAT GCCACCGCTG CCGGTCTTTT CGTGGCCAAT
CGCGCCGTTG TCGATCTGCT GAACCGCATA GATCCGGCGA TCACGCTCGC CTGCCTTGCC
GATCATGTTG CCGTCGAGGC CGGCGACATG GTGGCGACGA TCAAGATCAT CCCTCTTGCG
GTGCAGCAAG TGCTCGTGGA GCAAGCGCAG GCACTGCTTC GGGCGGACCG GGCCTTCGAG
GTCAAGCCGT TCACGCCTCG GCGCGCGGCC CTGGTGGCAA CCGAGCTGCC TTCCCTGAAG
AGCCAGGTAA TGGACAAGAC GCGCGCCGTT CTCACCACGC GGCTGCTGCA ATCGGACAGC
CGGCTCGATA GCGAGCGACG CGTGGCGCAT ACGACCGAAG CGGTCGCGGC AGCAATCGTC
GAGGCCGCCT CGACGCATGA CCTGATCATC GTCTTCGGCG CCTCGGCCGT GGCCGATCCC
GACGATGTTA TCCCGGCTGC CATCCGGCGC GCCGGCGGTG TCGTCGAACA TGTCGGAATG
CCCGTCGATC CAGGCAATCT GCTTGTGCTC GGTAGACTTG GCGAAATTCC TGTCCTGGGT
GCTCCCGGTT GTGCTCGAAG CCCGCGGGAA AACGGCTTTG ACTGGATCCT CGATCGTTTG
CTCGCGGGTG AGTGGCCGAG CAGCGAAGAC ATTACAGGGT TCGGCGTCGG CGGGTTGCTC
AAGGAAATAC CGACTCGTCC GCAGCCACGG GAAGGCATCG CCGACAAGCG CGCCGGCCCT
GTTGAGCTCG TCGTTCTGGC AGCCGGTAGG GCGAGCCGGA TGGGGCCGGA GGGCCGGCAC
AAGCTCCTGG CGGAGTTCGA AGGGATGCCG CTCGTGCGGC GGTCAGTGGA GGCGGCCATC
GGCGCGGCTC CGGGCAGAGT GACGGTGGTG ACCGGGCACA GGGAGGCCGA GATTCAGGCG
GCACTCGCAG GCTTGTCCGC CAACTTCGTC TCAAATCCCG ACTACGCGGG CGGGATGGCA
TCTTCGTTGA TTGCGGGCCT CTCCGCTCTC GACACCGGTG CTGGCGGCAT GCTCGTCATG
CTTGCCGATA TGCCGGGGAT CACATCGGAA CACCTGGCAG AATTGATCGC CGCCTTCGAA
GTCGAGTCCG GCCGAGCAGT GGTGCGTGCC GTCGCCGGTG GGCAGCGCGG CAATCCGGTC
ATTCTGCCAA AGGAGACATT CCACGCCGTC CGGCAGCTCG TCGGCGACGT CGGGGCCAGG
CACATCGTCG AGCGGTGCGG CTTGCCGGTG ATCGATGTCG AACTCGGCCC TGCTGCGCGT
CTCGATCTCG ACACACCGGA GGCGATCCTG GCTGCGGGTG GGATTTTGAA GGATTGA
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| Protein sequence | MRFGPVRPAD AEGALLGHSV KIGTVKLSKG HRLNPDDVAA LAEADVTEVI VAVLEPDDLP
EDEAASRIAA AIAPDHLRFS RAATGRVNIY ATAAGLFVAN RAVVDLLNRI DPAITLACLA
DHVAVEAGDM VATIKIIPLA VQQVLVEQAQ ALLRADRAFE VKPFTPRRAA LVATELPSLK
SQVMDKTRAV LTTRLLQSDS RLDSERRVAH TTEAVAAAIV EAASTHDLII VFGASAVADP
DDVIPAAIRR AGGVVEHVGM PVDPGNLLVL GRLGEIPVLG APGCARSPRE NGFDWILDRL
LAGEWPSSED ITGFGVGGLL KEIPTRPQPR EGIADKRAGP VELVVLAAGR ASRMGPEGRH
KLLAEFEGMP LVRRSVEAAI GAAPGRVTVV TGHREAEIQA ALAGLSANFV SNPDYAGGMA
SSLIAGLSAL DTGAGGMLVM LADMPGITSE HLAELIAAFE VESGRAVVRA VAGGQRGNPV
ILPKETFHAV RQLVGDVGAR HIVERCGLPV IDVELGPAAR LDLDTPEAIL AAGGILKD
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