Gene Smed_1448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1448 
Symbol 
ID5322302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1528260 
End bp1528751 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content61% 
IMG OID640790392 
Producthypothetical protein 
Protein accessionYP_001327128 
Protein GI150396661 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0257949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000320598 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCCGGG TTGCTGTTAT AGCCGCAAGA AGCGCCCTCA CGGCGCTTTT TTTGTTGTCG 
CTGCTCGTCG CCTCGGCCAT GGCCGAGGTT TCCTTTGCCA AGGAGCGGAT CCGGCTGATT
ACGGCGAGCG GACGAACGCA CGATCTTACG GTGGAGCTCG CGAGAGAGCC GGGCCAGCGC
GAGCAGGGGT TGATGTATCG CCGCCAGATG GCGCCAAATC ATGGCATGCT GTTCGATTTC
GGCGAGACGC GGCCGGTGAT GATGTGGATG AGAAACACCT ACTTGCCGCT CGACATGCTC
TTCATAGCCA GCGATGGCAC GATCCGCACC ATCCACGAGA ATGCGGTCCC GCTTTCCGAG
GCGATCATCG ATTCCCGGGA ACCCGTGGCA TACGTGCTCG AGCTCAACGC AGGAAGCGTG
AAAAGGCTCG GCATCAGCCC AGGGGACCGG CTCGAAGGCG CGGGCCTTCC GTCCACGGAA
AAGGCGAACT GA
 
Protein sequence
MSRVAVIAAR SALTALFLLS LLVASAMAEV SFAKERIRLI TASGRTHDLT VELAREPGQR 
EQGLMYRRQM APNHGMLFDF GETRPVMMWM RNTYLPLDML FIASDGTIRT IHENAVPLSE
AIIDSREPVA YVLELNAGSV KRLGISPGDR LEGAGLPSTE KAN