Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1448 |
Symbol | |
ID | 5322302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1528260 |
End bp | 1528751 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640790392 |
Product | hypothetical protein |
Protein accession | YP_001327128 |
Protein GI | 150396661 |
COG category | [S] Function unknown |
COG ID | [COG1430] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0257949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000320598 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCCGGG TTGCTGTTAT AGCCGCAAGA AGCGCCCTCA CGGCGCTTTT TTTGTTGTCG CTGCTCGTCG CCTCGGCCAT GGCCGAGGTT TCCTTTGCCA AGGAGCGGAT CCGGCTGATT ACGGCGAGCG GACGAACGCA CGATCTTACG GTGGAGCTCG CGAGAGAGCC GGGCCAGCGC GAGCAGGGGT TGATGTATCG CCGCCAGATG GCGCCAAATC ATGGCATGCT GTTCGATTTC GGCGAGACGC GGCCGGTGAT GATGTGGATG AGAAACACCT ACTTGCCGCT CGACATGCTC TTCATAGCCA GCGATGGCAC GATCCGCACC ATCCACGAGA ATGCGGTCCC GCTTTCCGAG GCGATCATCG ATTCCCGGGA ACCCGTGGCA TACGTGCTCG AGCTCAACGC AGGAAGCGTG AAAAGGCTCG GCATCAGCCC AGGGGACCGG CTCGAAGGCG CGGGCCTTCC GTCCACGGAA AAGGCGAACT GA
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Protein sequence | MSRVAVIAAR SALTALFLLS LLVASAMAEV SFAKERIRLI TASGRTHDLT VELAREPGQR EQGLMYRRQM APNHGMLFDF GETRPVMMWM RNTYLPLDML FIASDGTIRT IHENAVPLSE AIIDSREPVA YVLELNAGSV KRLGISPGDR LEGAGLPSTE KAN
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