| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1420 |
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| Symbol | |
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| ID | 5322271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1502278 |
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| End bp | 1503003 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640790362 |
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| Product | phosphatidylcholine synthase |
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| Protein accession | YP_001327101 |
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| Protein GI | 150396634 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1183] Phosphatidylserine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.206675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0327839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGTTTT TCAATTACAG ACGCGTTCCT TACGCCGAGA TCCGCGCCTT TTCCGTGCAC
ATCCTTACAG CCTCCGGATC GTTCCTGGCC TTTCTCGGCG TTGTCGCTGC GGCGGAGCAC
CGTTTCGTCG ACATGTTCTG GTGGCTCGGC CTGGCTCTGC TTGTGGACGG CATTGACGGT
CCGATTGCCC GCAAGGTCCA GGTCAAGGAA GTTTTGCCCA ACTGGTCCGG CGATACGCTC
GACAATGTTA TCGACTACGT GACCTATGTG CTGCTGCCGG CCTTCGCACT TTACCAGAGC
GGGATGATCG GCGAACCGTG GTCCTTCGTG GCAGCCGGCG CGATCGTGGT ATCGAGCGCA
ATCTACTATG CGGACATGGG GATGAAGACG GACGAGTATT TCTTTTCCGG ATTTCCGGTC
GTCTGGAATA TGGTCGTCTT CACCCTTTTC GTCATCCAGG CGAGTGAAGT GACTGCATCG
GTTGTCGTTT TCCTGTCCGT GATATTGACG TTCCTGCCGA TCAACTTCCT TCATCCAGTG
CGTGTAGAAA GACTGAGGCC GCTCAATCTC GGCATCTTCC TCATCTGGTC GGCGCTCGGC
ATGTATGCTC TGCTTCTGCA CTTCGAGACC CCCGCCTGGG TGGTCGTAGG CGTCGTTGCG
ACGGGGCTTT ATCTCTACGT CATCGGTTTC ATACTGCAGC TCTTCCCGAA GCTCGGGCGT
GCTTGA
|
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| Protein sequence | MKFFNYRRVP YAEIRAFSVH ILTASGSFLA FLGVVAAAEH RFVDMFWWLG LALLVDGIDG
PIARKVQVKE VLPNWSGDTL DNVIDYVTYV LLPAFALYQS GMIGEPWSFV AAGAIVVSSA
IYYADMGMKT DEYFFSGFPV VWNMVVFTLF VIQASEVTAS VVVFLSVILT FLPINFLHPV
RVERLRPLNL GIFLIWSALG MYALLLHFET PAWVVVGVVA TGLYLYVIGF ILQLFPKLGR
A
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