| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1418 |
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| Symbol | |
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| ID | 5322269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1499585 |
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| End bp | 1501219 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640790360 |
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| Product | ABC transporter related |
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| Protein accession | YP_001327099 |
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| Protein GI | 150396632 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.069949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.112153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCCAG TGCTGCATGC AGCAAAGGCC GGGGAAATCG AAGAGGGGAA AGAGGGCAGC
GTGCCTGTAA AGGGACAAAC CGCGAGCGGC CCGTTGCTGG CCGTTCGCCA GCTTACGAAA
TTGTTCGGCT CGTTCGCGGC CTGCAATGCA ATAGACCTGC AGATCGAACC CGGAGAAATC
CACGCGCTGC TCGGCGAGAA CGGCGCGGGA AAATCGACAT TGGTCAAGAT GCTCTTCGGC
GTGCTCGCGC CCACGTCCGG TGAGATCCGA TGGCGGGGGC GGAATGTCCG CATCACCAGC
CCGAGCGATG CCCGCTGCCT CGGGATCGGC ATGGTCTTTC AGCATTTTTC ATTGTTCGAG
GCGCTGACCG TTGCGGAGAA TATCGCTCTC TCGATGAATG GGAGCGTTTC GCTCGCCCGC
GTTGCCGAGG AGGCAGCACG GTTATCGCAG ATTTACGGGC TGCCGCTCGA TCCGAAGGCG
CATGTCGCCG ATCTCTCCGT CGGCGAACGG CAACGGATCG AAATCGTCCG GGCTCTCCTG
CAGAACCCGC AGCTCATCAT TCTCGACGAA CCGACTTCCG TGTTGACGCC GCAGGAAGCC
GACCGGCTTT TCGAGACGCT CCTGAAACTG AGATCCGAGG GGCGTTCCGT CCTCTATATC
AGCCATCGTC TCGAGGAAGT GCAGCGCATC TGCGACCGCG CAACGGTGCT GAGACACGGC
AAGGTCACCG GCGCCTGCGA CCCACGCGCC GAGACTCCCG CATCTCTCGC ACGGATGATG
GTCGGCAGTG ATGTAACCGT CGTGACTCCA GAGGGGACGA GCACCAGAGG CGACGTGCAA
TTGGAGGCGC GACATCTCTC GGTCGCGGCG CGCACGCCCT TTGCCGTATC ACTCAAGGAC
ATCTGTCTGA GGGTCAGGGC GGGCGAGGTG CTGGCCATCG CCGGAGTGGC CGGCAACGGG
CAGAGCGAAC TCTTCGACGC CCTTTCAGGC GAGTATCCGG TGGCTGACGA CGACGCCGTC
CAGATACGCC AGCGGCCGGT CGGCACGAGG AACATCAATG CGCGCCGGCT GATGGGGGCC
GGTTTCGTAC CGGAAGAGCG CCATGGGCAT GCCGCCATAT CGGGGTTGTC TCTCTCCGAC
AATCTCGTCC TGGCGCGCAG TCAATCCGAC CGGCAGGCGT TCCTCGGCGG AGGTGCCTTG
AAGATCATCC GTCATGGGGC GGTCAAGGCG GCAACGAGGC GCATTTCCGA GGCGATGGAC
GTGCGCAAGA GCGGCGACGA CCCGCCGGCC GGTTCACTTT CGGGCGGAAA CCTGCAGAAA
TTCATCGTCG GAAGGGAGCT GGACCGGCAA CCGGCGGTGC TCGTCGTCAA CCAGCCGACC
TGGGGCGTCG ACGCCGGAGC AGCGAGCCGT ATCCGCCAGG CGCTCGTCGA TCTCGCAAAA
GCCGGCTCCG CCGTGCTGGT GATCACCCAG GACCTCGACG AGATATTCGA AGTGGCGACG
GAAATCGCGG TGATCAACGA AGGACGTCTT TCCGATCCCT ATCCGGCGCG TGAACTTTCG
CGCGAAAAGA TCGGGCTGCT GATGGGCGGC ATGTCCGGGA AGACCGAAAG CGCGGGAGCA
GCGCATGCGC ATTGA
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| Protein sequence | MVPVLHAAKA GEIEEGKEGS VPVKGQTASG PLLAVRQLTK LFGSFAACNA IDLQIEPGEI
HALLGENGAG KSTLVKMLFG VLAPTSGEIR WRGRNVRITS PSDARCLGIG MVFQHFSLFE
ALTVAENIAL SMNGSVSLAR VAEEAARLSQ IYGLPLDPKA HVADLSVGER QRIEIVRALL
QNPQLIILDE PTSVLTPQEA DRLFETLLKL RSEGRSVLYI SHRLEEVQRI CDRATVLRHG
KVTGACDPRA ETPASLARMM VGSDVTVVTP EGTSTRGDVQ LEARHLSVAA RTPFAVSLKD
ICLRVRAGEV LAIAGVAGNG QSELFDALSG EYPVADDDAV QIRQRPVGTR NINARRLMGA
GFVPEERHGH AAISGLSLSD NLVLARSQSD RQAFLGGGAL KIIRHGAVKA ATRRISEAMD
VRKSGDDPPA GSLSGGNLQK FIVGRELDRQ PAVLVVNQPT WGVDAGAASR IRQALVDLAK
AGSAVLVITQ DLDEIFEVAT EIAVINEGRL SDPYPARELS REKIGLLMGG MSGKTESAGA
AHAH
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