Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1288 |
Symbol | |
ID | 5322135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1384194 |
End bp | 1385048 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640790229 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001326973 |
Protein GI | 150396506 |
COG category | [R] General function prediction only |
COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.263316 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTTC GGCGAGCCTT TACCGTTCTG GGTTGCGGCT CATCACCGGG CGTGCCGCGC ATCACGGGAG ATTGGGGCGC CTGCGATCCG TCGAACCCCC GCAACCGCCG CATGCGCGCG GCACTGCTCA TAGAGCAAAT TGGGCCGGAC GGCGGCAAGA CGACGGTCGT GATCGATACA GGCCCCGATT TCCGTGCCCA GATGATCGCT GCCAATGTTC GTCACATCGA CGCCGTGCTT TATACGCATG CCCATGCGGA TCATCTGCAC GGAATAGACG ATCTCCGCGG GTTCGTCATA GAGAATCGCA GGCGCGTGCC GATCTGGGCC GATGCCTTCA CCATGGCCCG TATCCGCGAC GGCTTCCGCT ACTGTCTGGA GTCGCCTCCC GGGAGCGGTT ATCCGCCGAT CGTGGAGCCC TATGTGATTC CCGACGACCT GCCGCCCTTG ACCATTCATG GCGCAGGTGG CCCGATCCCG TTCGAGCCCC TGATGCAGTT TCACGGCAAC GTCCATTCGC TCGGCTTCCG CATCGGCGAT TTTGCGTATT GCAGCGACGT CAGCGACTTT CCGCCGGAAA CGGCCGGTAA GCTGACCGGA CTTGATCTGC TCGTCATAGA CACGCTGCAG TACAAGTTTC ACCCTAGCCA TTTATCCCTG GTGCAATCGC TCGGATGGAT CAACCGGCTG CAGCCGAAGC GTGCGGTACT CACGCACATG CATGTGCCGC TGGATTATGA GACCGTAAGC GGCGAGACGC CTGATCACGT CGAGCCGGCT TACGACATGA TGCGTCTGGA GTTCGACGTC GACTTGCCGA TGGTGCAGAA CGATGTGAAG TCCAACATCG AATGA
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Protein sequence | MTFRRAFTVL GCGSSPGVPR ITGDWGACDP SNPRNRRMRA ALLIEQIGPD GGKTTVVIDT GPDFRAQMIA ANVRHIDAVL YTHAHADHLH GIDDLRGFVI ENRRRVPIWA DAFTMARIRD GFRYCLESPP GSGYPPIVEP YVIPDDLPPL TIHGAGGPIP FEPLMQFHGN VHSLGFRIGD FAYCSDVSDF PPETAGKLTG LDLLVIDTLQ YKFHPSHLSL VQSLGWINRL QPKRAVLTHM HVPLDYETVS GETPDHVEPA YDMMRLEFDV DLPMVQNDVK SNIE
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