Gene Smed_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1254 
SymbolgreA 
ID5322101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1344698 
End bp1345174 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content58% 
IMG OID640790195 
Producttranscription elongation factor GreA 
Protein accessionYP_001326939 
Protein GI150396472 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.378894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.504509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGACA AAGTGCCCAT GACACAGGGT GGATTCGTCA ATCTGCAGGA GGAGCTGCGT 
TGGCGCCAGC AGGAAGAACG CCCGCGCATC ATCGAGGCGA TCGCCGAGGC CCGCGCCCAT
GGTGACTTGT CGGAGAACGC CGAATATCAT GCGGCCAAGG AAGCGCAGAG CCATAACGAG
GGCAGGATCT CCGAACTCGA GGACCTGATC GCGCGCGCCG AAGTCATCGA TCTTTCGAAA
ATGTCCGGAT CGAAGATCAA GTTCGGCGCC AGGGTGAAGC TCGTCGACGA GGATACGGAA
GAAGAAAAGA CCTACCAGAT CGTCGGCGAT CAAGAGGCAG ACGTCAAACA GGGACGCATT
TCCATCTCTT CTCCGATCGC CCGCGCGTTG ATCGGCAAGG AAGTCGGCGA TTCGATCGAA
GTCAATGCTC CTGGTGGTTC CAAGGCGTAT GAGATTCTCG CCGTCCAATG GGGCTGA
 
Protein sequence
MVDKVPMTQG GFVNLQEELR WRQQEERPRI IEAIAEARAH GDLSENAEYH AAKEAQSHNE 
GRISELEDLI ARAEVIDLSK MSGSKIKFGA RVKLVDEDTE EEKTYQIVGD QEADVKQGRI
SISSPIARAL IGKEVGDSIE VNAPGGSKAY EILAVQWG