Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1254 |
Symbol | greA |
ID | 5322101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1344698 |
End bp | 1345174 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640790195 |
Product | transcription elongation factor GreA |
Protein accession | YP_001326939 |
Protein GI | 150396472 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.378894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.504509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGACA AAGTGCCCAT GACACAGGGT GGATTCGTCA ATCTGCAGGA GGAGCTGCGT TGGCGCCAGC AGGAAGAACG CCCGCGCATC ATCGAGGCGA TCGCCGAGGC CCGCGCCCAT GGTGACTTGT CGGAGAACGC CGAATATCAT GCGGCCAAGG AAGCGCAGAG CCATAACGAG GGCAGGATCT CCGAACTCGA GGACCTGATC GCGCGCGCCG AAGTCATCGA TCTTTCGAAA ATGTCCGGAT CGAAGATCAA GTTCGGCGCC AGGGTGAAGC TCGTCGACGA GGATACGGAA GAAGAAAAGA CCTACCAGAT CGTCGGCGAT CAAGAGGCAG ACGTCAAACA GGGACGCATT TCCATCTCTT CTCCGATCGC CCGCGCGTTG ATCGGCAAGG AAGTCGGCGA TTCGATCGAA GTCAATGCTC CTGGTGGTTC CAAGGCGTAT GAGATTCTCG CCGTCCAATG GGGCTGA
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Protein sequence | MVDKVPMTQG GFVNLQEELR WRQQEERPRI IEAIAEARAH GDLSENAEYH AAKEAQSHNE GRISELEDLI ARAEVIDLSK MSGSKIKFGA RVKLVDEDTE EEKTYQIVGD QEADVKQGRI SISSPIARAL IGKEVGDSIE VNAPGGSKAY EILAVQWG
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