| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1207 |
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| Symbol | |
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| ID | 5322054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1289077 |
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| End bp | 1291845 |
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| Gene Length | 2769 bp |
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| Protein Length | 922 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790148 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001326892 |
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| Protein GI | 150396425 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.598339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.808052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGTGC CACGGTTCAC ATTCGGCCCC TTCGAACTCG ACCCATTGCG GCTCGAGTTG
CGGCGCGATG GCGTAAAGCT ACGTGTCGGA GCAAAGGCTT GCAGACTGTT GCTGGCTCTC
GTCGAGCGTC CCGGTCACAT TGTTAGTCAG AAGGAACTTC TCGCCGCTGC CTGGTCTGGG
TTGAACGTCG AGGACGTGAA CCTTCGGGTC CATATCGTAG CCCTCCGCAA GGCCCTTTCA
GGTGTAGCGA ACGGAGCCTT CAATATCACC ACAGTGCCGC GCGAGGGATA CGTATTCGCT
GGGCCAGTCT CGGTCTCAGC CGCACCCGCC ATCGAGATGC CAGCGTCGCC GCCGGCGCGC
GTACCAAGAC AGCTCAGCAC ACTCTTCGGA AGGCGCGAAG CGCTGGCCAA CCTTGGAGAC
GCACTCGCCG CACATCGCAT CGTCACGATC GTCGGAGCCG GAGGCATGGG CAAGACTGCG
CTGGCGCTGG CGGCCATAGA GGAACATGCG GGTACAGAGT GCGTGTTCGT CGACTTCTCC
ACGTCCGTAT CGTCACTGCA TGTGCAGGGA TGCATATTTG AAGCACTGGA GCTCGAAGGG
ACACCGAACG ACGTCGCCGC CCATATCGTG CGCGCCCTCG CAAACAAGAC GATACTGCTC
GTCTTTGACA ATTGCGAACA TGTCGTCGGC GAGGTGGCAG CCATGGCGGC AAGGCTGACA
AGCAGAACCG AGGGCGTTTC AATCCTCGCA ACGAGCCGCG AGCCGCTGCG GGTTGCCGGC
GAGTGCGTCT TCCCGCTGGA GCCATTGAGT TGCCCGCCCG ACAGCGCCGA GCTGACGGCG
CAGTCGGCCA TGAGTTATCC GGCAGTCCAA ATGTTCGTGG AGGCCGCAGG GCGGCGATCA
GGCGCATTTG CCCTGGACGA CGGCAATGCG GCTCTCCTGG GTGACGTTTG CCGCCGTCTG
GATGGAAGCC CGCTCGCCAT AGAACTCGCC GCCGCCACCA GTGATGCGAT GACAATAGGC
GAACTCGCCC GGCGGCTCGA CGACCGCTTT ACCGTTCTGA TCCGTGGCGC CCGCACGGCA
TTGCCAAAGC ACCGGACGCT GCAGGCCGCG CTCGATTGGA GCTACGATAC CCTGAACGAG
GACGATGCTT TGGCGATGCG CTGCCTAGGT GTGTTTCCCG GAAGGTTTTC GGCCGAGGAT
GCGCAGGCGA TCGCCACTAT CGACACGATG TCGGGAGCGG CGGTTCACAA CACATTGGCG
AACCTGGTCG AAAAGTCACT CCTCACCGTC GAATTTGGAG AGGAGGCCGC CTCGTTCCGT
TTCCTCGAAA CGATGCGCGT CTACGCGCGA CTTAAGCTGC TGGACAGCGA AGAAGCTTCG
GCAGTCTATG GACGCTTCGT CGAATACACA CTGCTTAGGT TGACCGCTAT AAGCGGAAGG
GCGGCCTCCG CGAGCGATCT CAGGCGAAGC CACAGCGGCA TCCTCGACGA TTGGCGGGCA
GCGCATGATT GGTCAGTGAG AAGCGGCGAT TGGCATACGG CGTTGAAGTT GATGGCAGCC
GGGATTGGCT TCTGTCAGTC GCTCAACATC AGGACGGAGT ACGTGAACCG CGCGACCGAG
ACTATCCGGA ATATGCCTAC AGACGTGGAG GATGCAGATG CGTTGAGATT GGAAATGCTT
GTCTGCGACC ACACGGCACA GATGCTTATC GAAACGCAGC CTCCGGGCCC GTCGAACTTC
GTCGACCGGA TCGAAGCGGC GGCACGCCGA ACTCTGGATC TTTCAAAGCG GTTGAACGCG
CCAGACCAGC ATATGAGTGC ACTCGTGACG CTCGCGGTCG CAGCCCTGAC CGCAGCGAAT
TTGAAGAAGG TGGAAGTATA CGGATCGGAT GCCTTTGAAT TCGCGAAACG CGCACAGAGG
CCCGACTTTC TTCCGACAGC GCACTATCTC AATGGCTACG CGAGATATTA CGGCTCCGAC
TTCGCCAACG CGCTGCACGA ATGTGATCGC GCCCTGGATT TTGCCGCACA GTCGAATCTT
GGCACTTCAA GCGCGCTCGA CCACGTGCCG AATGTTCGAA TGCTCCGAGC GCGTGCACTG
TGGGCTCGCG GAGAGTTTGA GTCGAGTCTG GAGGAAATGG AGGAGGCCCA TCGTTTTGCG
ATCGAAAGTG GTCACGTCCC CACCATCGCC TGGGCAGCGT GGGGCGGCGT CCTAGTCTAT
CTGTGGGCAG GTGCCCACGA ACGGGCGGGT GCCAGCGCAA AGCTTCACGA AGATCTCGCG
AGCGAATACA GCAATCCCGG ATGGGCAAGA TACATCCCTA GTTTACACGA GGCGATGTCG
CGTCTTCGTG ATGGCCACCG ATCGTTCGGT GCCGCACCTA TCGATTGGAT GCCGTACGTC
CCTTCACATG CCGACTTCAT GACAAGTATT CATTGCGCAT TTCACAGGGC TGTCGATCTT
CAGCGCATTG AAGCCGTGCC GCGGCACTGG TGCGCGGCGG AGCACTTCCG CGCTGCTGGT
GAACACCACC TTGTTGCGGG TCGGACAATC GAAGCCGAAA AGTTGTTTCT GCATGCGCTG
GCGACATCCC AGTCGCATGG CAACATTGCC TGGGAAATAC GAGCTACCCT AAGTCTCGCG
CGCCTCAGGA TACAACAGGA TCAAGTCTTG GCTGCTCGGT CGCTTGTGGA GCCTCTCGCC
GACCGCTTCG CAAGTTCACG CGTCAATGCA GATCTTCTCT ACGCGGCGGA GCTGCTTGCC
GCCTGTTGA
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| Protein sequence | MSVPRFTFGP FELDPLRLEL RRDGVKLRVG AKACRLLLAL VERPGHIVSQ KELLAAAWSG
LNVEDVNLRV HIVALRKALS GVANGAFNIT TVPREGYVFA GPVSVSAAPA IEMPASPPAR
VPRQLSTLFG RREALANLGD ALAAHRIVTI VGAGGMGKTA LALAAIEEHA GTECVFVDFS
TSVSSLHVQG CIFEALELEG TPNDVAAHIV RALANKTILL VFDNCEHVVG EVAAMAARLT
SRTEGVSILA TSREPLRVAG ECVFPLEPLS CPPDSAELTA QSAMSYPAVQ MFVEAAGRRS
GAFALDDGNA ALLGDVCRRL DGSPLAIELA AATSDAMTIG ELARRLDDRF TVLIRGARTA
LPKHRTLQAA LDWSYDTLNE DDALAMRCLG VFPGRFSAED AQAIATIDTM SGAAVHNTLA
NLVEKSLLTV EFGEEAASFR FLETMRVYAR LKLLDSEEAS AVYGRFVEYT LLRLTAISGR
AASASDLRRS HSGILDDWRA AHDWSVRSGD WHTALKLMAA GIGFCQSLNI RTEYVNRATE
TIRNMPTDVE DADALRLEML VCDHTAQMLI ETQPPGPSNF VDRIEAAARR TLDLSKRLNA
PDQHMSALVT LAVAALTAAN LKKVEVYGSD AFEFAKRAQR PDFLPTAHYL NGYARYYGSD
FANALHECDR ALDFAAQSNL GTSSALDHVP NVRMLRARAL WARGEFESSL EEMEEAHRFA
IESGHVPTIA WAAWGGVLVY LWAGAHERAG ASAKLHEDLA SEYSNPGWAR YIPSLHEAMS
RLRDGHRSFG AAPIDWMPYV PSHADFMTSI HCAFHRAVDL QRIEAVPRHW CAAEHFRAAG
EHHLVAGRTI EAEKLFLHAL ATSQSHGNIA WEIRATLSLA RLRIQQDQVL AARSLVEPLA
DRFASSRVNA DLLYAAELLA AC
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