| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1162 |
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| Symbol | |
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| ID | 5322008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1239702 |
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| End bp | 1240430 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790103 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001326848 |
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| Protein GI | 150396381 |
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| COG category | [K] Transcription |
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| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
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| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.170122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.285603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCTGAAG CCCAGAAGAT CCTGCCGGTG TTACCGGATG GAGAGGACGA TGCCGAAGAA
GCCTCGGTCG CGCCAAGGCT CGAGCGGGAG GCAGAGCGGA TCGCCGAAGC GCTCGTCTTC
GCCTCCGCTC AACCGGTCTC GGAAACCTAT ATTGCCGGCC GGCTGCCGCG TGGCACCGAC
GTCGGAAGCG TTATGGCGCG GCTCAAAAGC CGGTATGCAG GCAGCGGCGT AAACCTCGTT
CAAGTCGCGG ACCATTGGGC CTTCCGTACC GCCGCGGATC TGTCCTTCGT CGTCCAGACG
GAGGAGCAAG AAGTCCGAAA GCTGTCGCGC GCCGCGCTGG AAGTGCTGGC GATCATCGCT
TATCACCAGC CGGTGACACG CGCCGAGATC GAGGACATAC GCGGCGTCCA GACCTCGAAG
GGTACCTTGG ACGTGCTGAT GGAGGCAGGG TGGGTTCGGT TCCGCGGTCG CAGGCGATCG
CCAGGGCGTC CGGTGACTTT CGGGACGACG AGAGATTTTC TCGATCATTT CGGCCTCGAA
GAGATCCGCG ATCTTCCGGG GATCGACGAG TTGAAGGGAG CCGGGCTTCT ATCGGGACGT
GTTCCCTCCA GCCTGAATAT TCCGGTTCCC GTCGGCGAGG ATGAATTTTC CGATAACGAG
GATCCGATAA CCCAGATGGA CTTGGAAGAG CTGGGCCTCT TGACACCGAA GGCTGAAGAA
GACGATTAG
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| Protein sequence | MAEAQKILPV LPDGEDDAEE ASVAPRLERE AERIAEALVF ASAQPVSETY IAGRLPRGTD
VGSVMARLKS RYAGSGVNLV QVADHWAFRT AADLSFVVQT EEQEVRKLSR AALEVLAIIA
YHQPVTRAEI EDIRGVQTSK GTLDVLMEAG WVRFRGRRRS PGRPVTFGTT RDFLDHFGLE
EIRDLPGIDE LKGAGLLSGR VPSSLNIPVP VGEDEFSDNE DPITQMDLEE LGLLTPKAEE
DD
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