Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1145 |
Symbol | |
ID | 5321991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1214802 |
End bp | 1217201 |
Gene Length | 2400 bp |
Protein Length | 799 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640790086 |
Product | ComEC/Rec2-related protein |
Protein accession | YP_001326831 |
Protein GI | 150396364 |
COG category | [R] General function prediction only |
COG ID | [COG0658] Predicted membrane metal-binding protein |
TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGAGA GTCAGGTACG GATTGTCTTG CGCGACGACG AGCACAGCTC TCCGCCCCCC GCCGAAGGCA CCGGGGTCGT CGCCGGCAAA TTGGCGATCG CCTCCGCCGG CCGAGCGCCT GCCGACCGGC GTTCTGCAAC CATTCGCAAC AGGACTCGTT CCACCGCCGC CGCTGTCTCC CGCGGGATAA GTCGTGCGGC CGCCGAAGAG CAGGAATACG GCCACGGCTT CGTCCTGGTT CCGGTCGTGC TCGCGCTCGG ATCCCTGGCA TGGTTTGCGC TGCCCGAAAC CGTCGGAACC GCTAAACTTG CAGCGCTGCT TTGCGTTTTC GGAATATCTG CGCTGCTTTG CCGAGGGAAC CTCCGCCCCT GGCGGCCTCT GGCGGTCGCG CCGGCACTGT TTGCTGCCGG CATGCTGCTC GCCGCGGCCG AAACGGCCAG GCGCGACACC GTCATTCTCG ACGCGCCCGT GACAACGACT GTTCGCGGGA CGGTTTTGTC ACGGGATCCG GACGACAGGG GACGCTGGCG CTATCTCGTG GAGATACAGG AAACATCGAA CCCGCGGCTG CGCAGGGCAC CGGAAAGGAC AACGCTTCTG GCGCGGAGCC GCCACGAGCC TTTTGCCATC GGGGCGATCA TCGAAGGCAA GGCCCGTTTG TCGCCGCCTT CGGGGCCTGC TCTGCCCGGT CTCAACGACT TCGCTTTCGG CGCCTATGTT AAAGGCTTGG GCGCGGTGGG GTTTTTCTAT GGTGCGCCGC GGGCGTTGGC GGGCGCCGCG TCAGGCAGAG ACATAGCAGA AACTTCGCTC GGGGAACGGG CGGCTGCATA TCTGGCACCG GTCCGCGAGG CGATCGGCAA CCGCATACGC TCGGCGATCG GTGGCGACAC GGGTGCGATC GCTGCCGCGC TCGTGACCGG CGAGGAGCGC GCGATCAGCC GAGAGGCGGT CGAGACATTG CGTGCGGCCG GCCTCTCGCA TGTCCTTGCG ATCTCCGGGC TTAACATGGT GCTCGCCGCG GGTACCTTTC TGATTGGCGC CCGGACGCTG CTGAGCCTCA TTCCCGGCCT GGCCGAAAGG CACTCCGCCA AGAAGATTGC CGCCGTCGGC GCTCTTCTCA TGGTCTTCTT CTATATCCTG ATTTCCGGTG GCGCCGTCTC GGCAGTCAGA TCCTGGATAA TGATTTCGAT CATGCTCGTC GCAGTGCTGT TCGACCGCGT TTCGATCAGC CTGCGCAACG TCGCGCTCGC CGCATTGATC ATTCTCGCCT GGACGCCGTC GGCGGCAGCC GGACCCGGAT TTCAAATGTC CTTTGCGGCG ACGCTTGCCC TTGTGGCGGG CTATGCCCGC TGGCGCGACC AGAGGAGAAA GCATCGAGAG AGCTCGGGCA GCCGGCCGGG CATGGGCGCC GTATCCAGCC TCGCTGTAGG CACCGTTGCC ACTTCCCTCA TTGGCGGAAT GGCGACCGCT GTCTACGCGG CTGCCCATTT CAACCGGCTT CCCGCCTACG GGCTGGTCGC AAATGTTCTC ACGACCCCTC TGACCAGCGT ACTCATTATG CCTTTCGCGC TGTTCGCGAT GCTGCTCATG CCATTTGGGC TCGAACATTA TCCGCTCGTG ATCATGGGGC AGGGGCTGGA TTGGATGATG GCGGTCGCGC GATATGTCGC CGCGCTCGAT GGCGAGTGGA CGACCGGGCG CATGGCCGAT GGGCCCTTCT TTCTCATCGC CCTCGGCGGC ACGCTGCTTT GCGTGTTGAG AACGCGATTG GCTCTTGGAG GCGCTGGGCT CGTCGCGTTG GGTGTATGCG TGATTGCTCT CGATCCGCGG GAGGAGCGCC CGTCGATCGT AATATCCGAG GACGCTCAAC TGGTCGGCCT CGTCACCGCT GATGCGATCG CGACCAATCG GAGCCGTCCG CCGGAGTTCA TCTTCTCGCA ATGGCGGCGG GCGCTTGCCG TCTCAGAGCA TGCAGTGCCG CTCGATCTCC CTGTGTACGC GGGAAGCGAC GTCGACACGG CAGCTTTGCT GGCTTCCGCC AAAGTGGGCG TTTTTACGTG CCGGAAAGGC ACCGGGTGCG TCGGTCGTAG CCGGGAAGGT TGGACAGTAG CGATTGTCGA AAAGGCCGAA TTGGTGCCCC TCTTGTGCGG TCACGCCGAT TTGGTCGTCG TTGCCAGCCG CCGGCCTGTG GCAGCCTGCC CGCCCGGCGC ATCGCTGATC ATAAGCACCA GGACGTTGCG ACGCACGGGG TCCGTTGAAA TTCATGCCGT GCCGGAGCAG GCGGGATCAC CGCGCATGCA GGTCGTCGGC TCGTTCTCCT CCACGGAAAG ACCCTGGCAG CGTCATCGCC GCTATGACTG GCGGGCCGGC AGTTTCGTGC CTGAGGGGTC ACCGCTTTGA
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Protein sequence | MAESQVRIVL RDDEHSSPPP AEGTGVVAGK LAIASAGRAP ADRRSATIRN RTRSTAAAVS RGISRAAAEE QEYGHGFVLV PVVLALGSLA WFALPETVGT AKLAALLCVF GISALLCRGN LRPWRPLAVA PALFAAGMLL AAAETARRDT VILDAPVTTT VRGTVLSRDP DDRGRWRYLV EIQETSNPRL RRAPERTTLL ARSRHEPFAI GAIIEGKARL SPPSGPALPG LNDFAFGAYV KGLGAVGFFY GAPRALAGAA SGRDIAETSL GERAAAYLAP VREAIGNRIR SAIGGDTGAI AAALVTGEER AISREAVETL RAAGLSHVLA ISGLNMVLAA GTFLIGARTL LSLIPGLAER HSAKKIAAVG ALLMVFFYIL ISGGAVSAVR SWIMISIMLV AVLFDRVSIS LRNVALAALI ILAWTPSAAA GPGFQMSFAA TLALVAGYAR WRDQRRKHRE SSGSRPGMGA VSSLAVGTVA TSLIGGMATA VYAAAHFNRL PAYGLVANVL TTPLTSVLIM PFALFAMLLM PFGLEHYPLV IMGQGLDWMM AVARYVAALD GEWTTGRMAD GPFFLIALGG TLLCVLRTRL ALGGAGLVAL GVCVIALDPR EERPSIVISE DAQLVGLVTA DAIATNRSRP PEFIFSQWRR ALAVSEHAVP LDLPVYAGSD VDTAALLASA KVGVFTCRKG TGCVGRSREG WTVAIVEKAE LVPLLCGHAD LVVVASRRPV AACPPGASLI ISTRTLRRTG SVEIHAVPEQ AGSPRMQVVG SFSSTERPWQ RHRRYDWRAG SFVPEGSPL
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