Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1080 |
Symbol | |
ID | 5321926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1149034 |
End bp | 1149615 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640790022 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001326767 |
Protein GI | 150396300 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.343448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCTG GCGCGACCCT CAGGCCTGCG AAACGAAGCG AAGCGGCGGA ACTTGCGATT CTCATCGATA TCGCCTCGCA TGGCTTTGCC TCGTGGCTCT GGTACGGCGG CGTCTTGAAC AAATCCGCGG AAACCGCTTT GGAGCATGGC CGCAATCTTT TGCGTCGCGA TGACGAGCCC GGTGCGTGGC AGGATGCGGT GGTGGCCGAA ATCGGCGGGG AGATCGCCGG CCTGTCCGTA TCCTACGGCA TCGATGCATC GATCCTGACC CTCGAGCCGA AGCATCCGGT TCTTGCGCCA TTGATCCACC TGCAGAGGCA GGTTGTCGGC CATTGGTTCA TCGACAGCCT CGGCGTCTAC CGCCACCATC GCGGCAAAGG CATGGGCCGG GCGCTGCTGC AGAACGAGAT TTCCCGCGCT GGACAGGCGC CGGTGAGCCT GATCACCGAA AGCCACAATG AAACGGCACA GGCACTCTAC AGGATGAACG GCTTCGAGGA AGTGGCGCGC GCCGCTGCGG TTCCACTCTT CGAAGACAGC AGGAAACACG ACTGGGTGCT TTTCACCCGC AACGTCGCTT GA
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Protein sequence | MTAGATLRPA KRSEAAELAI LIDIASHGFA SWLWYGGVLN KSAETALEHG RNLLRRDDEP GAWQDAVVAE IGGEIAGLSV SYGIDASILT LEPKHPVLAP LIHLQRQVVG HWFIDSLGVY RHHRGKGMGR ALLQNEISRA GQAPVSLITE SHNETAQALY RMNGFEEVAR AAAVPLFEDS RKHDWVLFTR NVA
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