Gene Smed_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1080 
Symbol 
ID5321926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1149034 
End bp1149615 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content62% 
IMG OID640790022 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001326767 
Protein GI150396300 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.343448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCTG GCGCGACCCT CAGGCCTGCG AAACGAAGCG AAGCGGCGGA ACTTGCGATT 
CTCATCGATA TCGCCTCGCA TGGCTTTGCC TCGTGGCTCT GGTACGGCGG CGTCTTGAAC
AAATCCGCGG AAACCGCTTT GGAGCATGGC CGCAATCTTT TGCGTCGCGA TGACGAGCCC
GGTGCGTGGC AGGATGCGGT GGTGGCCGAA ATCGGCGGGG AGATCGCCGG CCTGTCCGTA
TCCTACGGCA TCGATGCATC GATCCTGACC CTCGAGCCGA AGCATCCGGT TCTTGCGCCA
TTGATCCACC TGCAGAGGCA GGTTGTCGGC CATTGGTTCA TCGACAGCCT CGGCGTCTAC
CGCCACCATC GCGGCAAAGG CATGGGCCGG GCGCTGCTGC AGAACGAGAT TTCCCGCGCT
GGACAGGCGC CGGTGAGCCT GATCACCGAA AGCCACAATG AAACGGCACA GGCACTCTAC
AGGATGAACG GCTTCGAGGA AGTGGCGCGC GCCGCTGCGG TTCCACTCTT CGAAGACAGC
AGGAAACACG ACTGGGTGCT TTTCACCCGC AACGTCGCTT GA
 
Protein sequence
MTAGATLRPA KRSEAAELAI LIDIASHGFA SWLWYGGVLN KSAETALEHG RNLLRRDDEP 
GAWQDAVVAE IGGEIAGLSV SYGIDASILT LEPKHPVLAP LIHLQRQVVG HWFIDSLGVY
RHHRGKGMGR ALLQNEISRA GQAPVSLITE SHNETAQALY RMNGFEEVAR AAAVPLFEDS
RKHDWVLFTR NVA