| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1045 |
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| Symbol | |
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| ID | 5321891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1115326 |
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| End bp | 1116057 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640789988 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001326733 |
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| Protein GI | 150396266 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.899807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAGG ATCAGGCGGC AACATCACCG GATACCGATG GCGAAGGTGC TGCAAGCCGC
GGCCGCGAAC CCGCCTTCAA TCTCCCGCGG GGACTGACAG CTATCCTCTT GTTTCTGGCC
TTGGTTCACT TTTTGAGAAC CTATGTTCTG CCGGCCGAAC TCGACCGCGA GGTGATTCTC
AATTTCGCCT TCTTACCGGT GCGCTACACG CTTCCGCTCG GCGAGCAGGG ACTGGTTTGG
CTGTGGACGC CAGTGAGCTA TTCCTTTCTG CACGGCAGTT GGGAGCATCT GATCTTCAAT
ATATTCTGGA TGATCGCGTT CGGCGCGCCG GTGGTGAGGC GGATAGGCAT TGGCCGACTG
GCTGTGTTCT GGTGCCTGTC GGCAGCCGCC GCCGTCGGAT TGCACGTTAT ATTCCACTGG
GGAGAGATGG CCGTGGTGAT CGGGGCTTCG GGAGTCGTTT CGGGTCTGAT GGGGGCGGCG
GCGCGATTTG TATTTTCTCC GAGCGGTCGC ATCAGCCGCC AGTTTGCCCA TCTCAATAGG
CGGCTTTCGT TTGCCGAGAC GCTCACCAAC CGGTCCGCGC TCGTCTTCAC CGGCATCTGG
TTCCTGACCA ACTTTCTGGT GGGTTTTGGC ATCTTGTCGA TCGGAGGTGC GGGAAGCGTA
GCCTGGGAGG CGCATATTGG CGGGTTTCTT TTCGGTTTCC TGCTGTTCGC CTTCTTCGAT
CCGCGCGGCT AA
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| Protein sequence | MQQDQAATSP DTDGEGAASR GREPAFNLPR GLTAILLFLA LVHFLRTYVL PAELDREVIL
NFAFLPVRYT LPLGEQGLVW LWTPVSYSFL HGSWEHLIFN IFWMIAFGAP VVRRIGIGRL
AVFWCLSAAA AVGLHVIFHW GEMAVVIGAS GVVSGLMGAA ARFVFSPSGR ISRQFAHLNR
RLSFAETLTN RSALVFTGIW FLTNFLVGFG ILSIGGAGSV AWEAHIGGFL FGFLLFAFFD
PRG
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