| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1026 |
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| Symbol | lipB |
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| ID | 5321871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1094639 |
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| End bp | 1095427 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640789968 |
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| Product | lipoate-protein ligase B |
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| Protein accession | YP_001326714 |
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| Protein GI | 150396247 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0321] Lipoate-protein ligase B |
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| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000441542 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACAGGC CGGAAAAGAA CAGCATTCGC AAGGTTACCA TGCAGCGCGA AGACCTTATC
CAGAGCATGT TCGCACCGCC GGAAGCGCCA CCGGTGCGCT GGCGTATCGC ACCTGCCCCC
GTCGATTATC AGGAAGCCGT TGAAACAATG GAGCGGGAAG CCGCTGATAT CGCGGCCGGC
ACAGCCGATG AATTGGTCTG GCTGGTCGAG CACCCGCCGC TTTACACAGC AGGGACAAGC
GCCAACGCGG CCGACCTCGT AATCCCGGAT CGCTTTCCGG TCTTCGCAAC CGGAAGAGGC
GGTGAATACA CCTATCACGG CCCAGGGCAG CGGGTCGTCT ACGTCATGCT CGACCTGAAG
CGCCGACGCC AGGATGTTCG CGCCTTTGTC GCCGCACTCG AAAGCGTCAT CATAGCCACG
CTCGATTCCA TGAACGTCAA GGGCGAGCGC CGCGAGGATC GCGTCGGCGT CTGGGTGCGC
CGCCCGGAGA AGCCGCCGCT CATGGATGGC ACGGTTGCGG AGGACAAGAT CGCCGCGATC
GGCATTCGGT TGCGCCGATG GGTGAGCTTC CACGGATTGT CGCTGAACGT AGATCCCGAT
CTAGAACATT TCGATGGGAT CGTGCCTTGC GGAATCAGGG GCCACGGCGT CACGAGCCTC
GTCGATCTCG GCCTACCCGT GATGATGGCG GACGTCGATA TCAGGCTGAG AGAGGCCTTC
GAGATGGTCT TCGGCCCAAC CAGAAGCGAG ACGAACGGCA TCGGGACAGC CCGCCTGGAA
AGCGAATAA
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| Protein sequence | MYRPEKNSIR KVTMQREDLI QSMFAPPEAP PVRWRIAPAP VDYQEAVETM EREAADIAAG
TADELVWLVE HPPLYTAGTS ANAADLVIPD RFPVFATGRG GEYTYHGPGQ RVVYVMLDLK
RRRQDVRAFV AALESVIIAT LDSMNVKGER REDRVGVWVR RPEKPPLMDG TVAEDKIAAI
GIRLRRWVSF HGLSLNVDPD LEHFDGIVPC GIRGHGVTSL VDLGLPVMMA DVDIRLREAF
EMVFGPTRSE TNGIGTARLE SE
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