Gene Smed_1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1023 
Symbol 
ID5321868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1092310 
End bp1092750 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content61% 
IMG OID640789965 
Producthypothetical protein 
Protein accessionYP_001326711 
Protein GI150396244 
COG category[S] Function unknown 
COG ID[COG1671] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.374455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTATG TCGATGCGGA TGCGTGCCCG GTAAAACCGG AAATACTCAG GGTGGCGGAG 
CGCCACGGAG TCGAGGTGAC CTTCGTTGCC AATTCCGGCC TGCGCCCCTC ACGTGATCCG
ATGGTTCGCA ATGTCATCGT GTCGGCAAGT TTCGACGCCG CGGATGATTG GATCGCCGAA
CGCGCCGGCG GAGATGATAT TGTTGTGACG GCCGATGTGC CACTTGCCGT GCGTTGCGTC
GGTGCCGGAG CACTCGTTAC CGGTCCGACG GGGCGCGTGT TCGACGAGAC GAATATCGGC
ATGGCATCCG CGATGCGCGA TCTCTCGGCC CATCTCAGGG AAACCGGCGA GAGCAAGGGC
TATAACGCTG CTCTCACCTC CCGCGACCGT TCGGCATTTC TCGAAACGCT TGACCGCCTC
TGCCGACGCG TAAAAAAGTA G
 
Protein sequence
MIYVDADACP VKPEILRVAE RHGVEVTFVA NSGLRPSRDP MVRNVIVSAS FDAADDWIAE 
RAGGDDIVVT ADVPLAVRCV GAGALVTGPT GRVFDETNIG MASAMRDLSA HLRETGESKG
YNAALTSRDR SAFLETLDRL CRRVKK