Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0968 |
Symbol | |
ID | 5321810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1045110 |
End bp | 1045985 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640789907 |
Product | RNA methyltransferase |
Protein accession | YP_001326656 |
Protein GI | 150396189 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0219055 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAAGG ACAAAACGGG CGACAAGAGC GCCAGAGACA CCCATTATGC AAATCTCCGG CGGGCGCATC GAGACGGCCG CCGCGAACGC GGGGAAATCC CGACGCCGCG CCAGGACAAG CGCGGCAAGC CTTCTGCCGA CTGGAAGCCG CCGGCACTCG CCCCCGATCA GGTGCTGCTC TATGGCCTGC ACACGGTCCG CGCCGCCCTC GACAATCCGG AACGGCGGAT CATCCGGCTC TCGGTCACAC AGAACGCCGC AGCGCGCCTT GATCTCGGCG ACTCGGCGGC GCTTCCCTTT CCGGTCGAGA CCGTGACGCC GCAGGAGCTC GATCGGATTC TCGGACCAGA CGCCATCCAC CAGGGCGTGA TGCTGGAGAC GCGGCCGCTG CCGCACCGCA AGCTCGAGGC GCTTCGCGAC TGCCCCCTGA TCCTCGTCCT CGATCAGGTG ACCGATCCCC ACAATGTTGG AGCGATCATG CGTTCGGCGG TTGCATTCGA CGCCGGCGCC CTCATTACGA CGATGCGCCA TAGTCCCACC GAATCGGGCG TATTGGCGAA ATCGGCCTCC GGCGCGCTGG AACTCATCCC TTACATCCAG ATCAGCAATC TCGCCGATAC GATCGACGAG CTCCACGCCC TCGGCTTCAT GACGATCGGC CTCGATTCGG AGGGGCCACA GCCGCTCGAA GGTACATTCG CAGGCGACAA GATCGCGCTC GTGCTCGGCT CGGAAGGCAA GGGTTTGCGG CAGAAAACGC GGCAGACGGT CAAGGCGCTC GCCCGTCTCG ACATGCCCGG TGCAATCAAA TCGCTGAATG TGTCGAATGC CGCCGCGATC GCCATGTATG CGGCGAGACA TCATCTCAAG GGATAG
|
Protein sequence | MSKDKTGDKS ARDTHYANLR RAHRDGRRER GEIPTPRQDK RGKPSADWKP PALAPDQVLL YGLHTVRAAL DNPERRIIRL SVTQNAAARL DLGDSAALPF PVETVTPQEL DRILGPDAIH QGVMLETRPL PHRKLEALRD CPLILVLDQV TDPHNVGAIM RSAVAFDAGA LITTMRHSPT ESGVLAKSAS GALELIPYIQ ISNLADTIDE LHALGFMTIG LDSEGPQPLE GTFAGDKIAL VLGSEGKGLR QKTRQTVKAL ARLDMPGAIK SLNVSNAAAI AMYAARHHLK G
|
| |