| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0878 |
|---|
| Symbol | |
|---|
| ID | 5321716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 939774 |
|---|
| End bp | 941051 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640789815 |
|---|
| Product | metallophosphoesterase |
|---|
| Protein accession | YP_001326568 |
|---|
| Protein GI | 150396101 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0420] DNA repair exonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTCC GATTTGTTCA CACCGCAGAC CTCCATCTCG ATTCGCCCTT GCGCAGCCTC
GCACTTCGGA ATTCCGAACT TGCAGGCCTC GTTCGAAGCG CTACGCGCAG CGCGCTCGTG
CGGATCGTCG ATCTCTGCGT CGCCGAAAGC GTCGACGCGC TTCTGATCGC CGGCGATCTC
TACGACGGCA GCCAGACGTC GATGAATACG GCTCTCTTTC TGGCAGGCGA GCTCCGACGC
CTCGATGAGG CCGGGATCCG GACGTTCATC ATTCGCGGCA ATCACGATTC CCAGTCACAG
GTGACGCGCG AACTCGCCCT GCCGCCTTCG GTGCACGTCT TTTCAGGCCG GAGCAGGACG
GTTCTTGCCA AGACGCTTGC GAATGGCCGC ACCGTGCATA TCCATGGCGT GAGCTTTGCC
GATCCGCATG CGCCTGAAAG CCTGTTGCCG CAGTTCCATC CGCCGGTCGC GGGCGGCATC
AATATCGGCA TGCTGCATAC CAGCCTTTCC GGATCCGCCG CGCATGATCC CTACGCCCCG
TGCAGCGTCG CCGACCTTCA GCGGCACGGT TTCGACTATT GGGCGCTCGG CCATGTCCAT
CAACGGCAGG TGCATTGCGA AAAGCCCTAC ATCGTCATGG CGGGCATGCC GCAGGGGCGC
GACATCAACG AAGCAGGCAT GAAGGGCGTC ACGATCGTGA CGTTCGATGA GGACGGGCCC
GCTGCGCTGG ATGAGAGGCC GATCAGCACC GCCGCATTCG AGCGCTTTGC GGTCGACGTC
AGCGGAATTG CCGACTGGCA CGATATGCTG GACGCGGTCA GCCGCGCTTT GGCCCATATT
CGCAAGACCG TGGCAGCGGA CAACCTGATC CTTCGTTTGA CATTGAAGGG CAGCACGCCA
CTCGCATGGC GCCTCAGGCG GGATGCGGAT CTCCTGGAGG GGGAGATCGT CAATATCGCG
GCGGGGCTAG GCGGATGCTG GATAGAGACT GTCGAGCTAA GCTGCCGCGC ATCTGTCAAG
CCGGAGCAGA ATGCCGTCGA CCCCGTCGGC GAACTGGCGG TGCTCATCGA AAAGGACGTT
CTGCCTTCCT TCGGCTTTCG CACCGAGCTG AACGGTATTG CCAAGGAACT CCTGCAGCAA
TTGCCGCCCG AACTCAGGTC CTTGCTGGCG AGCGACGAAG AGGCTCTGGA GCGGTTGGCG
CTGGATGCAG GGCTTGCCGG TGGAGCGGAT GTACTGGCAC ACCTGCACGG CCGTGCTGCA
GCCGGAGCGG CCGACTGA
|
|---|
| Protein sequence | MPFRFVHTAD LHLDSPLRSL ALRNSELAGL VRSATRSALV RIVDLCVAES VDALLIAGDL
YDGSQTSMNT ALFLAGELRR LDEAGIRTFI IRGNHDSQSQ VTRELALPPS VHVFSGRSRT
VLAKTLANGR TVHIHGVSFA DPHAPESLLP QFHPPVAGGI NIGMLHTSLS GSAAHDPYAP
CSVADLQRHG FDYWALGHVH QRQVHCEKPY IVMAGMPQGR DINEAGMKGV TIVTFDEDGP
AALDERPIST AAFERFAVDV SGIADWHDML DAVSRALAHI RKTVAADNLI LRLTLKGSTP
LAWRLRRDAD LLEGEIVNIA AGLGGCWIET VELSCRASVK PEQNAVDPVG ELAVLIEKDV
LPSFGFRTEL NGIAKELLQQ LPPELRSLLA SDEEALERLA LDAGLAGGAD VLAHLHGRAA
AGAAD
|
|---|
| |