Gene Smed_0826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0826 
Symbol 
ID5321663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp889366 
End bp889902 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content59% 
IMG OID640789763 
Productubiquinol-cytochrome C chaperone 
Protein accessionYP_001326517 
Protein GI150396050 
COG category[S] Function unknown 
COG ID[COG5452] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.62214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.144248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTTG GACTGTTCAA GAAAAAAAGC GGCAATATTG CGATTGTGAA GCGCCAATAT 
GAGGCACTGA CCGCAGCGGC GCGCCAACCG TTTCTCTATA CCGACCTCGA TGTGCCCGAC
ACGGTCATGG GTCGCTTCGA GATGTTGTCG GCGGTTCTGA TCCTCTATTT CCGCCGCACG
CGCAGCTCGG CGCGTGCCGG TCAGGAGATT GCGCAGGAGA TCGTTGATGC CTTCTTCGAG
GATGTGGACC ATTCCATCCG TGAGCTCGGC GTGGGTGATG TGAGCGTACC GAAGAAGATG
AAGAAACTCG CCGGCATGTT CTATGGCCGC CTCGAATCCT ATGCGGCGGC GCTCGAAGGA
CGGGATGCCG GCGCGCTGGC GGCTGCACTG CGGCGCAATT TTCATGCCGA TGTGGAAGAC
GCCCCGTCGA TGCGGGGGTT GGCATCCTAC CTTCTTGCGG TCGAATCCGT GCTCTCGGAC
ACCGCCGAAG AGGACGTGGA AACGGGCCGT TTGCGAATCC CCACGGCCGG AACGTAA
 
Protein sequence
MIFGLFKKKS GNIAIVKRQY EALTAAARQP FLYTDLDVPD TVMGRFEMLS AVLILYFRRT 
RSSARAGQEI AQEIVDAFFE DVDHSIRELG VGDVSVPKKM KKLAGMFYGR LESYAAALEG
RDAGALAAAL RRNFHADVED APSMRGLASY LLAVESVLSD TAEEDVETGR LRIPTAGT