Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0816 |
Symbol | glyA |
ID | 5321653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 879563 |
End bp | 880858 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640789753 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_001326507 |
Protein GI | 150396040 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.38724 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCAC AGCCAAACGA CGCTTTCTTC GCCCGCTCTC TCGCTGACAG CGACCCGGAC ATCTTCGGTG CGATCGAGAA GGAGCTGGGT CGCCAGCGCC ATGAGATCGA GCTGATTGCC TCCGAGAACA TCGTCTCACG GGCCGTGCTC GAGGCGCAAG GCTCCATCAT GACCAACAAA TACGCCGAAG GTTACCCGGG AAAGCGCTAT TACGGCGGCT GCCAATATGT CGACATCGCC GAGGAACTGG CGATCGAGCG CGCCAAGAAG CTCTTCGGCG TCGGCTTTGC CAACGTCCAG CCGAATTCGG GCTCGCAGAT GAACCAGGCG GTTTTCCTGG CGCTCCTGCA GCCGGGCGAT ACCTTCATGG GCCTCGACCT CAATTCCGGC GGCCACCTCA CGCACGGATC CCCGGTGAAC ATGTCGGGCA AATGGTTCAA CGTCGTTTCC TACGGCGTGC GCGAAGACGA TCACCTCCTC GACATGGATG ACGTTGCCAA GAAGGCGCGC GAGCATAAGC CGAAGCTGAT CATCGCGGGC GGAACGGCCT ATTCCCGGAT CTGGGACTGG AAGCGCTTCC GCGAGATCGC CGACGAGGTT GGCGCCTGGC TGATGGTCGA CATGGCTCAT ATTGCCGGGC TCGTCGCCGG TGATCAGCAC CCGTCGCCGT TTCCTCATTG CCACGTCGCG ACGACGACCA CCCACAAGTC TTTGCGCGGG CCCCGCGGCG GCATGATCCT CACCAATGAC GAGGAAATTG CAAAGAAGAT CAATTCCGCG GTTTTCCCCG GCCTTCAGGG CGGACCGCTG ATGCACGTGA TCGCAGCCAA GGCCGTCGCG TTCGGCGAAG CGCTGCAGCC TTCCTTCAAG GACTACGCGG CTCAGGTTGT GAAGAATGCG CGCACGCTTG CCGACACGCT CAAGGCCAAT GGGCTGGACA TCGTCTCGGG CGGCACCGAC AACCATCTGA TGCTGGTGGA TCTGCGCAAG AAGAACGCCA CCGGCAAGCG TGCCGAAGCT GCGCTTGGCC GCGCCTATGT CACCTGCAAC AAGAACGGCA TTCCCTTTGA CCCGGAAAAA CCCTTCGTCA CATCAGGCGT TCGCCTGGGC ACACCGGCCG GGACGACGCG CGGTTTCAAG GAAGCGGAAT TCAAGGAGAT CGGCGAATTG ATCGTCGAGG TCCTCGACGG CCTCAAGGCT GCCAATTCCG ATGAAGGCAA TGCTGCCGTC GAGGCCGGCG TGCGCGAGAA GGTGATGAAG CTCACCGGCC GTTTCCCAAT GTATGGCTAT ATGTGA
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Protein sequence | MPSQPNDAFF ARSLADSDPD IFGAIEKELG RQRHEIELIA SENIVSRAVL EAQGSIMTNK YAEGYPGKRY YGGCQYVDIA EELAIERAKK LFGVGFANVQ PNSGSQMNQA VFLALLQPGD TFMGLDLNSG GHLTHGSPVN MSGKWFNVVS YGVREDDHLL DMDDVAKKAR EHKPKLIIAG GTAYSRIWDW KRFREIADEV GAWLMVDMAH IAGLVAGDQH PSPFPHCHVA TTTTHKSLRG PRGGMILTND EEIAKKINSA VFPGLQGGPL MHVIAAKAVA FGEALQPSFK DYAAQVVKNA RTLADTLKAN GLDIVSGGTD NHLMLVDLRK KNATGKRAEA ALGRAYVTCN KNGIPFDPEK PFVTSGVRLG TPAGTTRGFK EAEFKEIGEL IVEVLDGLKA ANSDEGNAAV EAGVREKVMK LTGRFPMYGY M
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